Pa_6_3170 (Podospora anserina)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Pa_6_3170 T57941_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Pa_6_3170 RRM 269 333
Pa_6_3170 RRM 357 424

Links

Other RRM family RBPs
Other Podospora anserina RBPs

13 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh2_pg.1_#_466 Thielavia terrestris fgenesh2_pg.1_#_466 N 0.940
fgenesh1_pm.1_#_413 Myceliophthora thermophila fgenesh1_pm.1_#_413 N 0.932
CHGG_04655 Chaetomium globosum CHGG_04655 N 0.925
fgenesh1_pm.C_scaffold_4000255 Neurospora tetrasperma fgenesh1_pm.C_scaffold_4000255 N 0.843
e_gw1.3.1867.1 Neurospora discreta e_gw1.3.1867.1 N 0.843
NCU09742 Neurospora crassa NCU09742 N 0.843
estExt_fgenesh1_pg.C_30620 Cryphonectria parasitica estExt_fgenesh1_pg.C_30620 N 0.778
VDBG_08298 Verticillium albo atrum VDBG_08298 N 0.759
e_gw1.2.858.1 Trichoderma reesei e_gw1.2.858.1 N 0.746
gw1.1.1031.1 Trichoderma virens gw1.1.1031.1 N 0.739
GLRG_05733 Colletotrichum graminicola GLRG_05733 N 0.739
fgenesh1_pg.C_scaffold_2000270 Trichoderma atroviride fgenesh1_pg.C_scaffold_2000270 N 0.731
FOXG_08275 Fusarium oxysporum FOXG_08275 N 0.722