fgenesh1_pm.C_scaffold_4000255 (Neurospora tetrasperma)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pm.C_scaffold_4000255 T52081_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.C_scaffold_4000255 RRM 257 322
fgenesh1_pm.C_scaffold_4000255 RRM 345 410

Links

Other RRM family RBPs
Other Neurospora tetrasperma RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
NCU09742 Neurospora crassa NCU09742 N 1.000
e_gw1.3.1867.1 Neurospora discreta e_gw1.3.1867.1 N 1.000
CHGG_04655 Chaetomium globosum CHGG_04655 N 0.910
fgenesh1_pm.1_#_413 Myceliophthora thermophila fgenesh1_pm.1_#_413 N 0.895
fgenesh2_pg.1_#_466 Thielavia terrestris fgenesh2_pg.1_#_466 N 0.895
Pa_6_3170 Podospora anserina Pa_6_3170 N 0.843
GLRG_05733 Colletotrichum graminicola GLRG_05733 N 0.795
estExt_fgenesh1_pg.C_30620 Cryphonectria parasitica estExt_fgenesh1_pg.C_30620 N 0.770
VDBG_08298 Verticillium albo atrum VDBG_08298 N 0.769
e_gw1.2.858.1 Trichoderma reesei e_gw1.2.858.1 N 0.759
fgenesh1_pg.C_scaffold_2000270 Trichoderma atroviride fgenesh1_pg.C_scaffold_2000270 N 0.754
gw1.1.1031.1 Trichoderma virens gw1.1.1031.1 N 0.746
FOXG_08275 Fusarium oxysporum FOXG_08275 N 0.731
BC1G_03224 Botrytis cinerea BC1G_03224 N 0.709
SS1G_08605 Sclerotinia sclerotiorum SS1G_08605 N 0.701