fgenesh1_pm.1_#_413 (Myceliophthora thermophila)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pm.1_#_413 T52040_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.1_#_413 RRM 254 318
fgenesh1_pm.1_#_413 RRM 342 408

Links

Other RRM family RBPs
Other Myceliophthora thermophila RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh2_pg.1_#_466 Thielavia terrestris fgenesh2_pg.1_#_466 N 0.992
CHGG_04655 Chaetomium globosum CHGG_04655 N 0.977
Pa_6_3170 Podospora anserina Pa_6_3170 N 0.932
NCU09742 Neurospora crassa NCU09742 N 0.895
e_gw1.3.1867.1 Neurospora discreta e_gw1.3.1867.1 N 0.895
fgenesh1_pm.C_scaffold_4000255 Neurospora tetrasperma fgenesh1_pm.C_scaffold_4000255 N 0.895
e_gw1.2.858.1 Trichoderma reesei e_gw1.2.858.1 N 0.767
estExt_fgenesh1_pg.C_30620 Cryphonectria parasitica estExt_fgenesh1_pg.C_30620 N 0.756
gw1.1.1031.1 Trichoderma virens gw1.1.1031.1 N 0.754
VDBG_08298 Verticillium albo atrum VDBG_08298 N 0.752
fgenesh1_pg.C_scaffold_2000270 Trichoderma atroviride fgenesh1_pg.C_scaffold_2000270 N 0.746
GLRG_05733 Colletotrichum graminicola GLRG_05733 N 0.744
FOXG_08275 Fusarium oxysporum FOXG_08275 N 0.722
BC1G_03224 Botrytis cinerea BC1G_03224 N 0.714
SS1G_08605 Sclerotinia sclerotiorum SS1G_08605 N 0.707