PMAA_011470 (Penicillium marneffei)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PMAA_011470 T58256_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PMAA_011470.t1 RRM 15 85
PMAA_011470.t1 RRM 103 173

Links

Other RRM family RBPs
Other Penicillium marneffei RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BDBG_09421 Blastomyces dermatitidis BDBG_09421 N 0.930
HCAG_06893 Histoplasma capsulatum HCAG_06893 N 0.930
CPSG_00446 Coccidioides posadasii CPSG_00446 N 0.915
UREG_03156 Uncinocarpus reesii UREG_03156 N 0.915
CIMG_02600 Coccidioides immitis CIMG_02600 N 0.915
TERG_06435 Trichophyton rubrum TERG_06435 N 0.894
ARB_04284 Arthroderma benhamiae ARB_04284 N 0.894
TRV_00155 Trichophyton verrucosum TRV_00155 N 0.894
PABG_07859 Paracoccidioides brasiliensis PABG_07859 N 0.894
MCYG_05258 Microsporum canis MCYG_05258 N 0.894
MGYG_06302 Microsporum gypseum MGYG_06302 N 0.894
NFIA_051760 Neosartorya fischeri CADNFIAG00005042 N 0.888
ACLA_095350 Aspergillus clavatus CADACLAG00009128 N 0.888
AFUA_6G05180 Aspergillus fumigatus CADAFUAG00000741 N 0.888
ANIA_06501 Aspergillus nidulans CADANIAG00007269 N 0.881
An15g00100 Aspergillus niger CADANGAG00011688 N 0.881
AFLA_054780 Aspergillus flavus CADAFLAG00006087 N 0.881
e_gw1.00735.103.1 Aspergillus carbonarius e_gw1.00735.103.1 N 0.867
BC1G_13457 Botrytis cinerea BC1G_13457 N 0.859
SS1G_09077 Sclerotinia sclerotiorum SS1G_09077 N 0.859
Pc12g04780 Penicillium chrysogenum Pc12g04780 N 0.853
ATEG_05656 Aspergillus terreus CADATEAG00000804 N 0.845
GSTUMT00011313001 Tuber melanosporum GSTUMT00011313001 N 0.803
e_gw1.8.426.1 Mycosphaerella graminicola e_gw1.8.426.1 N 0.768
TEQG_04730 Trichophyton equinum TEQG_04730 N 0.768
estExt_Genewise1Plus.C_150062 Mycosphaerella fijiensis estExt_Genewise1Plus.C_150062 N 0.761
estExt_Genewise1Plus.C_20198 Mucor circinelloides estExt_Genewise1Plus.C_20198 I 0.720
estExt_Genewise1Plus.C_330054 Phycomyces blakesleeanus estExt_Genewise1Plus.C_330054 I 0.706