An15g00100 (Aspergillus niger)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CADANGAG00011688 T33579_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00011466 RRM 15 85
CADANGAP00011466 RRM 103 173

Links

Other RRM family RBPs
Other Aspergillus niger RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AFUA_6G05180 Aspergillus fumigatus CADAFUAG00000741 N 0.972
NFIA_051760 Neosartorya fischeri CADNFIAG00005042 N 0.972
e_gw1.00735.103.1 Aspergillus carbonarius e_gw1.00735.103.1 N 0.972
ACLA_095350 Aspergillus clavatus CADACLAG00009128 N 0.972
AFLA_054780 Aspergillus flavus CADAFLAG00006087 N 0.965
ANIA_06501 Aspergillus nidulans CADANIAG00007269 N 0.958
Pc12g04780 Penicillium chrysogenum Pc12g04780 N 0.937
ATEG_05656 Aspergillus terreus CADATEAG00000804 N 0.926
UREG_03156 Uncinocarpus reesii UREG_03156 N 0.881
CPSG_00446 Coccidioides posadasii CPSG_00446 N 0.881
CIMG_02600 Coccidioides immitis CIMG_02600 N 0.881
PMAA_011470 Penicillium marneffei PMAA_011470 N 0.881
HCAG_06893 Histoplasma capsulatum HCAG_06893 N 0.874
BDBG_09421 Blastomyces dermatitidis BDBG_09421 N 0.874
MCYG_05258 Microsporum canis MCYG_05258 N 0.860
MGYG_06302 Microsporum gypseum MGYG_06302 N 0.860
TERG_06435 Trichophyton rubrum TERG_06435 N 0.860
ARB_04284 Arthroderma benhamiae ARB_04284 N 0.860
TRV_00155 Trichophyton verrucosum TRV_00155 N 0.860
PABG_07859 Paracoccidioides brasiliensis PABG_07859 N 0.846
SS1G_09077 Sclerotinia sclerotiorum SS1G_09077 N 0.818
BC1G_13457 Botrytis cinerea BC1G_13457 N 0.818
GSTUMT00011313001 Tuber melanosporum GSTUMT00011313001 N 0.755
estExt_Genewise1Plus.C_150062 Mycosphaerella fijiensis estExt_Genewise1Plus.C_150062 N 0.748
e_gw1.8.426.1 Mycosphaerella graminicola e_gw1.8.426.1 N 0.741
TEQG_04730 Trichophyton equinum TEQG_04730 N 0.734
estExt_Genewise1Plus.C_330054 Phycomyces blakesleeanus estExt_Genewise1Plus.C_330054 I 0.729
estExt_Genewise1Plus.C_20198 Mucor circinelloides estExt_Genewise1Plus.C_20198 I 0.722
SPPG_04182 Spizellomyces punctatus SPPG_04182 I 0.708