SS1G_09077 (Sclerotinia sclerotiorum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SS1G_09077 T30987_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SS1T_09077 RRM 14 84
SS1T_09077 RRM 102 172

Links

Other RRM family RBPs
Other Sclerotinia sclerotiorum RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_13457 Botrytis cinerea BC1G_13457 N 1.000
BDBG_09421 Blastomyces dermatitidis BDBG_09421 N 0.901
HCAG_06893 Histoplasma capsulatum HCAG_06893 N 0.887
PABG_07859 Paracoccidioides brasiliensis PABG_07859 N 0.887
UREG_03156 Uncinocarpus reesii UREG_03156 N 0.887
CPSG_00446 Coccidioides posadasii CPSG_00446 N 0.880
CIMG_02600 Coccidioides immitis CIMG_02600 N 0.880
ARB_04284 Arthroderma benhamiae ARB_04284 N 0.873
MCYG_05258 Microsporum canis MCYG_05258 N 0.873
TERG_06435 Trichophyton rubrum TERG_06435 N 0.873
TRV_00155 Trichophyton verrucosum TRV_00155 N 0.873
MGYG_06302 Microsporum gypseum MGYG_06302 N 0.873
PMAA_011470 Penicillium marneffei PMAA_011470 N 0.859
e_gw1.00735.103.1 Aspergillus carbonarius e_gw1.00735.103.1 N 0.818
An15g00100 Aspergillus niger CADANGAG00011688 N 0.818
AFUA_6G05180 Aspergillus fumigatus CADAFUAG00000741 N 0.818
AFLA_054780 Aspergillus flavus CADAFLAG00006087 N 0.818
ACLA_095350 Aspergillus clavatus CADACLAG00009128 N 0.818
ANIA_06501 Aspergillus nidulans CADANIAG00007269 N 0.818
NFIA_051760 Neosartorya fischeri CADNFIAG00005042 N 0.818
Pc12g04780 Penicillium chrysogenum Pc12g04780 N 0.804
GSTUMT00011313001 Tuber melanosporum GSTUMT00011313001 N 0.796
ATEG_05656 Aspergillus terreus CADATEAG00000804 N 0.791
TEQG_04730 Trichophyton equinum TEQG_04730 N 0.754
e_gw1.8.426.1 Mycosphaerella graminicola e_gw1.8.426.1 N 0.732
estExt_Genewise1Plus.C_150062 Mycosphaerella fijiensis estExt_Genewise1Plus.C_150062 N 0.732
estExt_Genewise1Plus.C_20198 Mucor circinelloides estExt_Genewise1Plus.C_20198 I 0.727
SPPG_04182 Spizellomyces punctatus SPPG_04182 I 0.720
RO3G_10200 Rhizopus oryzae RO3G_10200 I 0.713
estExt_Genewise1Plus.C_330054 Phycomyces blakesleeanus estExt_Genewise1Plus.C_330054 I 0.706
e_gw1.2.1555.1 Heterobasidion annosum e_gw1.2.1555.1 N 0.706