estExt_Genewise1Plus.C_150062 (Mycosphaerella fijiensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1Plus.C_150062 T51386_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_150062 RRM 15 85
estExt_Genewise1Plus.C_150062 RRM 112 182

Links

Other RRM family RBPs
Other Mycosphaerella fijiensis RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.8.426.1 Mycosphaerella graminicola e_gw1.8.426.1 N 0.852
MGYG_06302 Microsporum gypseum MGYG_06302 N 0.775
TERG_06435 Trichophyton rubrum TERG_06435 N 0.775
TRV_00155 Trichophyton verrucosum TRV_00155 N 0.775
ARB_04284 Arthroderma benhamiae ARB_04284 N 0.775
MCYG_05258 Microsporum canis MCYG_05258 N 0.775
CPSG_00446 Coccidioides posadasii CPSG_00446 N 0.768
BDBG_09421 Blastomyces dermatitidis BDBG_09421 N 0.768
CIMG_02600 Coccidioides immitis CIMG_02600 N 0.768
HCAG_06893 Histoplasma capsulatum HCAG_06893 N 0.761
PMAA_011470 Penicillium marneffei PMAA_011470 N 0.761
UREG_03156 Uncinocarpus reesii UREG_03156 N 0.761
ANIA_06501 Aspergillus nidulans CADANIAG00007269 N 0.755
e_gw1.00735.103.1 Aspergillus carbonarius e_gw1.00735.103.1 N 0.755
GSTUMT00011313001 Tuber melanosporum GSTUMT00011313001 N 0.754
An15g00100 Aspergillus niger CADANGAG00011688 N 0.748
NFIA_051760 Neosartorya fischeri CADNFIAG00005042 N 0.741
ACLA_095350 Aspergillus clavatus CADACLAG00009128 N 0.741
AFUA_6G05180 Aspergillus fumigatus CADAFUAG00000741 N 0.741
Pc12g04780 Penicillium chrysogenum Pc12g04780 N 0.741
AFLA_054780 Aspergillus flavus CADAFLAG00006087 N 0.741
SS1G_09077 Sclerotinia sclerotiorum SS1G_09077 N 0.732
BC1G_13457 Botrytis cinerea BC1G_13457 N 0.732
PABG_07859 Paracoccidioides brasiliensis PABG_07859 N 0.732
e_gw1.2.1555.1 Heterobasidion annosum e_gw1.2.1555.1 N 0.727
genemark.276_g Pleurotus ostreatus genemark.276_g N 0.727
estExt_Genewise1Plus.C_920074 Postia placenta estExt_Genewise1Plus.C_920074 I 0.727
CC1G_10837 Coprinopsis cinerea CC1G_10837 N 0.727
estExt_fgenesh2_pm.C_20717 Agaricus bisporus estExt_fgenesh2_pm.C_20717 N 0.720
e_gwh2.1.820.1 Phanerochaete chrysosporium e_gwh2.1.820.1 N 0.720
ATEG_05656 Aspergillus terreus CADATEAG00000804 N 0.716
estExt_fgenesh1_kg.C_70028 Melampsora laricis populina estExt_fgenesh1_kg.C_70028 N 0.713
e_gw1.2.2306.1 Schizophyllum commune e_gw1.2.2306.1 I 0.713
RO3G_10200 Rhizopus oryzae RO3G_10200 I 0.713
fgenesh2_kg.11_#_983_#_7076_1_CFOT Serpula lacrymans fgenesh2_kg.11_#_983_#_7076_1_CFOT N 0.713
estExt_GeneWisePlus_worm.C_60233 Laccaria bicolor estExt_GeneWisePlus_worm.C_60233 N 0.713
estExt_Genewise1Plus.C_330054 Phycomyces blakesleeanus estExt_Genewise1Plus.C_330054 I 0.706
SPPG_04182 Spizellomyces punctatus SPPG_04182 I 0.706