AAH56021 (Xenopus laevis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AAH56021 T59488_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
fne
M115_0.6 		Drosophila melanogaster UUKDGUU RNAcompete
Ray et al.(2013)
RNCMPT00120 		0.713
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AAH56021 RRM 53 94
AAH56021 RRM 113 152
AAH56021 RRM 168 236
AAH56021 RRM 319 389

Links

Other RRM family RBPs
Other Xenopus laevis RBPs

20 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Q7SZT7 Xenopus laevis Q7SZT7 I 1.000
AAH43735 Xenopus laevis AAH43735 I 1.000
elavl4 Xenopus tropicalis ENSXETG00000008680 I 0.995
ELAVL4 Oryzias latipes ENSORLG00000017130 I 0.938
ELAVL4 Takifugu rubripes ENSTRUG00000000523 I 0.872
DGIL_AUG5s1005g4t1 Acyrtosiphon pisum DGIL_AUG5s1005g4t1 I 0.720
AAEL006675 Aedes aegypti AAEL006675 I 0.719
PHUM065370 Pediculus humanus PHUM065370 I 0.717
GF21392 Drosophila ananassae FBgn0098394 I 0.713
fne Drosophila melanogaster FBgn0086675 D 0.713
GJ16518 Drosophila virilis FBgn0203702 I 0.709
GA22283-RA Drosophila pseudoobscura FBgn0243690 I 0.709
GK25647 Drosophila willistoni FBgn0227606 I 0.709
GL22975 Drosophila persimilis FBgn0160565 I 0.709
GG17743 Drosophila erecta FBgn0109965 I 0.709
GH24423 Drosophila grimshawi FBgn0131879 I 0.709
GI16282 Drosophila mojavensis FBgn0139031 I 0.709
fne Drosophila yakuba FBgn0067971 I 0.709
GM11591 Drosophila sechellia FBgn0166534 I 0.704
AAEL008516 Aedes aegypti AAEL008516 I 0.701