CAA30972 (Xenopus laevis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CAA30972 T59680_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SNRNP70
M068_0.6 		Homo sapiens RWUCAAG RNAcompete
Ray et al.(2013)
RNCMPT00070 		0.919
snRNP70K
M134_0.6 		Drosophila melanogaster AUCAHG RNAcompete
Ray et al.(2013)
RNCMPT00143 		0.743
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
CAA30972 RRM 105 178

Links

Other RRM family RBPs
Other Xenopus laevis RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
P09406 Xenopus laevis P09406 I 1.000
AAH81025 Xenopus laevis AAH81025 I 1.000
AAH97714 Xenopus laevis AAH97714 I 1.000
AAI08448 Xenopus laevis AAI08448 I 1.000
SNRNP70 Macropus eugenii ENSMEUG00000015650 I 0.892
SNRNP70 Anolis carolinensis ENSACAG00000013276 I 0.846
snrnp70 Xenopus tropicalis ENSXETG00000022919 I 0.846
SNRNP70 Ornithorhynchus anatinus ENSOANG00000005213 I 0.833
Snrnp70 Mus musculus ENSMUSG00000063511 I 0.833
SNRNP70 Myotis lucifugus ENSMLUG00000011766 I 0.833
SNRNP70 Oryctolagus cuniculus ENSOCUG00000015081 I 0.833
SNRNP70 Spermophilus tridecemlineatus ENSSTOG00000013988 I 0.833
Ame_R005855 Ailuropoda melanoleuca Ame_R005855 I 0.833
SNRNP70 Tursiops truncatus ENSTTRG00000017099 I 0.833
Snrnp70 Rattus norvegicus ENSRNOG00000020763 I 0.833
SNRNP70 Pan troglodytes ENSPTRG00000011277 I 0.833
ENSPPYG00000010234 Pongo pygmaeus ENSPPYG00000010234 I 0.833
SNRNP70 Macaca mulatta ENSMMUG00000004928 I 0.833
SNRNP70 Cavia porcellus ENSCPOG00000019589 I 0.833
RU17_BOVIN Bos taurus ENSBTAG00000001996 I 0.833
LOC100392779 Callithrix jacchus ENSCJAG00000000193 I 0.833
SNRNP70 Canis familiaris ENSCAFG00000003711 I 0.833
SNRNP70 Loxodonta africana ENSLAFG00000028536 I 0.833
Snrnp70 Dipodomys ordii ENSDORG00000010228 I 0.833
SNRNP70 Gorilla gorilla ENSGGOG00000008245 I 0.833
SNRNP70 Homo sapiens ENSG00000104852 D 0.833
SNRNP70 Erinaceus europaeus ENSEEUG00000005666 I 0.833
SNRNP70 Gasterosteus aculeatus ENSGACG00000000448 I 0.821
snrnp70 Danio rerio ENSDARG00000077126 I 0.821
SNRNP70 Takifugu rubripes ENSTRUG00000009202 I 0.808
113249 Helobdella robusta 113249 I 0.757
ISCW021751 Ixodes scapularis ISCW021751 I 0.756
BGIBMGA011988 Bombyx mori BGIBMGA011988 I 0.756
amel4_ncbi_hmm14979 Apis mellifera amel4_ncbi_hmm14979 I 0.744
DGIL_AUG5s10626g1p1t1 Acyrtosiphon pisum DGIL_AUG5s10626g1p1t1 I 0.744
nasonia_NCBI_hmm246143 Nasonia vitripennis nasonia_NCBI_hmm246143 I 0.744
SNRNP70 Pteropus vampyrus ENSPVAG00000009578 I 0.744
PHUM022320 Pediculus humanus PHUM022320 I 0.744
AGAP006755 Anopheles gambiae AGAP006755 I 0.718
DGIL_AUG5s10040g3t1 Acyrtosiphon pisum DGIL_AUG5s10040g3t1 I 0.705
GI24161 Drosophila mojavensis FBgn0146884 I 0.705
XP_002157902.1 Hydra magnipapillata XP_002157902.1 I 0.703