TRV_06617 (Trichophyton verrucosum)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 TRV_06617 T60049_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
TRV_06617 S1 242 316

Links

Other S1 family RBPs
Other Trichophyton verrucosum RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ARB_03894 Arthroderma benhamiae ARB_03894 N 1.000
TESG_05437 Trichophyton tonsurans TESG_05437 N 1.000
MGYG_03171 Microsporum gypseum MGYG_03171 N 0.987
TERG_04997 Trichophyton rubrum TERG_04997 N 0.987
CPSG_07949 Coccidioides posadasii CPSG_07949 N 0.882
AFUA_5G10830 Aspergillus fumigatus CADAFUAG00006235 N 0.880
NFIA_076400 Neosartorya fischeri CADNFIAG00008573 N 0.867
ATEG_07640 Aspergillus terreus CADATEAG00000474 N 0.867
UREG_00720 Uncinocarpus reesii UREG_00720 N 0.855
CIMG_00743 Coccidioides immitis CIMG_00743 N 0.855
ACLA_013700 Aspergillus clavatus CADACLAG00000914 N 0.853
PMAA_073440 Penicillium marneffei PMAA_073440 N 0.853
TEQG_01284 Trichophyton equinum TEQG_01284 N 0.853
AO090010000458 Aspergillus oryzae CADAORAG00004519 N 0.853
PABG_04784 Paracoccidioides brasiliensis PABG_04784 N 0.853
AFLA_119410 Aspergillus flavus CADAFLAG00012513 N 0.853
An14g03770 Aspergillus niger CADANGAG00011313 N 0.840
ANIA_04721 Aspergillus nidulans CADANIAG00005708 N 0.840
HCAG_00961 Histoplasma capsulatum HCAG_00961 N 0.827
Pc21g10420 Penicillium chrysogenum Pc21g10420 N 0.813
BDBG_08912 Blastomyces dermatitidis BDBG_08912 N 0.813
fgenesh1_pg.C_chr_9000466 Mycosphaerella graminicola fgenesh1_pg.C_chr_9000466 N 0.747
estExt_fgenesh1_pg.C_30380 Cryphonectria parasitica estExt_fgenesh1_pg.C_30380 N 0.724
SS1G_13866 Sclerotinia sclerotiorum SS1G_13866 N 0.724
estExt_fgenesh2_pg.C_30399 Neurospora discreta estExt_fgenesh2_pg.C_30399 N 0.720
SNOG_08693 Stagonospora nodorum SNOG_08693 N 0.720
EAT83861.1 Phaeosphaeria nodorum EAT83861.1 N 0.720
NCU06318 Neurospora crassa NCU06318 N 0.707
BC1G_13853 Botrytis cinerea BC1G_13853 N 0.707