CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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UREG_00720
(
Uncinocarpus reesii
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
UREG_00720
T60056_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
URET_00720
S1
252
327
RPILYKIYDGRVTGIKEFGAFVNLQGVRGKVDGLVHVSSMQDGARVNHPSDLVSRGQPVKVKIVSIQGTRIGLSMK
Links
Other
S1
family RBPs
Other
Uncinocarpus reesii
RBPs
26 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CPSG_07949
Coccidioides posadasii
CPSG_07949
N
0.921
CIMG_00743
Coccidioides immitis
CIMG_00743
N
0.908
TERG_04997
Trichophyton rubrum
TERG_04997
N
0.868
AFUA_5G10830
Aspergillus fumigatus
CADAFUAG00006235
N
0.868
TRV_06617
Trichophyton verrucosum
TRV_06617
N
0.855
NFIA_076400
Neosartorya fischeri
CADNFIAG00008573
N
0.855
ARB_03894
Arthroderma benhamiae
ARB_03894
N
0.855
TESG_05437
Trichophyton tonsurans
TESG_05437
N
0.855
ATEG_07640
Aspergillus terreus
CADATEAG00000474
N
0.855
PABG_04784
Paracoccidioides brasiliensis
PABG_04784
N
0.842
ACLA_013700
Aspergillus clavatus
CADACLAG00000914
N
0.842
MGYG_03171
Microsporum gypseum
MGYG_03171
N
0.842
PMAA_073440
Penicillium marneffei
PMAA_073440
N
0.842
AFLA_119410
Aspergillus flavus
CADAFLAG00012513
N
0.842
AO090010000458
Aspergillus oryzae
CADAORAG00004519
N
0.842
ANIA_04721
Aspergillus nidulans
CADANIAG00005708
N
0.829
An14g03770
Aspergillus niger
CADANGAG00011313
N
0.829
BDBG_08912
Blastomyces dermatitidis
BDBG_08912
N
0.816
Pc21g10420
Penicillium chrysogenum
Pc21g10420
N
0.816
HCAG_00961
Histoplasma capsulatum
HCAG_00961
N
0.803
SS1G_13866
Sclerotinia sclerotiorum
SS1G_13866
N
0.737
TEQG_01284
Trichophyton equinum
TEQG_01284
N
0.724
estExt_fgenesh2_pg.C_30399
Neurospora discreta
estExt_fgenesh2_pg.C_30399
N
0.724
NCU06318
Neurospora crassa
NCU06318
N
0.711
estExt_fgenesh1_pg.C_30380
Cryphonectria parasitica
estExt_fgenesh1_pg.C_30380
N
0.711
GLRG_07196
Colletotrichum graminicola
GLRG_07196
N
0.711