Aqu1.220878 (Amphimedon queenslandica)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 Aqu1.220878 T60971_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
eIF-2alpha
M231_0.6 		Drosophila melanogaster WGCAUG RNAcompete
Ray et al.(2013)
RNCMPT00273 		0.776
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
Aqu1.220878 S1 12 87

Links

Other S1 family RBPs
Other Amphimedon queenslandica RBPs

130 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
EIF2S1 Canis familiaris ENSCAFG00000016386 I 0.829
eif2s1l Danio rerio ENSDARG00000005827 I 0.829
IF2A_BOVIN Bos taurus ENSBTAG00000016311 I 0.829
EIF2S1 Anolis carolinensis ENSACAG00000005994 I 0.829
EIF2S1 Procavia capensis ENSPCAG00000002613 I 0.829
ENSPPYG00000005921 Pongo pygmaeus ENSPPYG00000005921 I 0.829
IF2A_CHICK Gallus gallus ENSGALG00000009565 I 0.829
Eif2s1 Rattus norvegicus ENSRNOG00000009432 I 0.829
EIF2S1 Gasterosteus aculeatus ENSGACG00000008569 I 0.829
LOC100399114 Callithrix jacchus ENSCJAG00000015368 I 0.829
AAH46576 Xenopus laevis AAH46576 I 0.829
Q7ZTK4 Xenopus laevis Q7ZTK4 I 0.829
Eif2s1 Dipodomys ordii ENSDORG00000002382 I 0.829
EIF2S1 Ochotona princeps ENSOPRG00000004520 I 0.829
IF2A_RABIT Oryctolagus cuniculus ENSOCUG00000012023 I 0.829
eif2s1 Danio rerio ENSDARG00000052178 I 0.829
EIF2S1 Oryzias latipes ENSORLG00000011844 I 0.829
LOC100052709 Equus caballus ENSECAG00000018424 I 0.829
EIF2S1 Homo sapiens ENSG00000134001 I 0.829
EIF2S1 Ornithorhynchus anatinus ENSOANG00000005409 I 0.829
EIF2S1 Echinops telfairi ENSETEG00000019003 I 0.829
EIF2S1 Erinaceus europaeus ENSEEUG00000010225 I 0.829
Ame_R013633 Ailuropoda melanoleuca Ame_R013633 I 0.829
EIF2S1 Pan troglodytes ENSPTRG00000006462 I 0.829
EIF2S1 Gorilla gorilla ENSGGOG00000001603 I 0.829
EIF2S1 Taeniopygia guttata ENSTGUG00000011542 I 0.829
EIF2S1 Meleagris gallopavo ENSMGAG00000011974 I 0.829
EIF2S1 Microcebus murinus ENSMICG00000010793 I 0.829
EIF2S1 Macaca mulatta ENSMMUG00000021419 I 0.829
Eif2s1 Mus musculus ENSMUSG00000021116 I 0.829
EIF2S1 Monodelphis domestica ENSMODG00000009911 I 0.829
EIF2S1 Takifugu rubripes ENSTRUG00000017958 I 0.829
EIF2S1 Loxodonta africana ENSLAFG00000013423 I 0.829
EIF2S1 Tetraodon nigroviridis ENSTNIG00000012223 I 0.829
EIF2S1 Sus scrofa ENSSSCG00000002289 I 0.829
EIF2S1 Cavia porcellus ENSCPOG00000003313 I 0.829
EIF2S1 Spermophilus tridecemlineatus ENSSTOG00000001565 I 0.829
EIF2S1 Sorex araneus ENSSARG00000011682 I 0.829
EIF2S1 Tursiops truncatus ENSTTRG00000015806 I 0.816
estExt_fgenesh2_pm.C_sca_10068 Lottia gigantea estExt_fgenesh2_pm.C_sca_10068 I 0.816
EIF2S1 Tarsius syrichta ENSTSYG00000014171 I 0.816
ENSCHOG00000009030 Choloepus hoffmanni ENSCHOG00000009030 I 0.816
ENSCHOG00000004230 Choloepus hoffmanni ENSCHOG00000004230 I 0.816
e_gw1.7.228.1 Trichoplax adhaerens e_gw1.7.228.1 I 0.803
e_gw.114.57.1 Nematostella vectensis e_gw.114.57.1 I 0.803
estExt_Genewise1Plus.C_2350006 Capitella teleta estExt_Genewise1Plus.C_2350006 I 0.803
estExt_GenewiseH_1.C_750056 Nematostella vectensis estExt_GenewiseH_1.C_750056 I 0.803
AGAP011190 Anopheles gambiae AGAP011190 I 0.789
AAEL013675 Aedes aegypti AAEL013675 I 0.789
PHUM551010 Pediculus humanus PHUM551010 I 0.789
amel4_ncbi_hmm23817 Apis mellifera amel4_ncbi_hmm23817 I 0.789
nasonia_NCBI_hmm338664 Nasonia vitripennis nasonia_NCBI_hmm338664 I 0.789
CpipJ_CPIJ011194 Culex pipiens CpipJ_CPIJ011194 I 0.789
ISCW017360 Ixodes scapularis ISCW017360 I 0.789
CPIJ011194 Culex quinquefasciatus CPIJ011194 I 0.789
ENSCHOG00000003744 Choloepus hoffmanni ENSCHOG00000003744 I 0.789
BGIBMGA004302 Bombyx mori BGIBMGA004302 I 0.789
estExt_fgenesh2_pm.C_5760005 Branchiostoma floridae estExt_fgenesh2_pm.C_5760005 I 0.789
estExt_fgenesh2_pm.C_1660010 Branchiostoma floridae estExt_fgenesh2_pm.C_1660010 I 0.789
GL20268 Drosophila persimilis FBgn0157863 I 0.776
GG19321 Drosophila erecta FBgn0111525 I 0.776
GF19374 Drosophila ananassae FBgn0096384 I 0.776
GI21763 Drosophila mojavensis FBgn0144493 I 0.776
XP_001176396.1 Strongylocentrotus purpuratus XP_001176396.1 I 0.776
GK25248 Drosophila willistoni FBgn0227207 I 0.776
GJ19141 Drosophila virilis FBgn0206286 I 0.776
GE15968 Drosophila yakuba FBgn0233524 I 0.776
eIF-2alpha Drosophila melanogaster FBgn0261609 D 0.776
PASA_GEN_0500123 Daphnia pulex PASA_GEN_0500123 I 0.776
XP_001176254.1 Strongylocentrotus purpuratus XP_001176254.1 I 0.776
XP_002156465.1 Hydra magnipapillata XP_002156465.1 I 0.776
GA22144-RA Drosophila pseudoobscura FBgn0082124 I 0.776
GM13399 Drosophila sechellia FBgn0168330 I 0.776
XP_801812.1 Strongylocentrotus purpuratus XP_801812.1 I 0.776
XP_779939.1 Strongylocentrotus purpuratus XP_779939.1 I 0.776
GD15749 Drosophila simulans FBgn0187410 I 0.776
DGIL_AUG5s12507g4t1 Acyrtosiphon pisum DGIL_AUG5s12507g4t1 I 0.776
Bm1_04900 Brugia malayi Bm1_04900 I 0.763
EIF2S1 Pteropus vampyrus ENSPVAG00000003040 I 0.763
WUBG_12485 Wuchereria bancrofti WUBG_12485 I 0.763
LOAG_09556 Loa loa LOAG_09556 I 0.763
PPA05168 Pristionchus pacificus PPA05168 I 0.750
114622 Helobdella robusta 114622 I 0.750
PHATRDRAFT_34538 Phaeodactylum tricornutum Phatr34538 I 0.750
69770 Aureococcus anophagefferens 69770 I 0.737
72304 Aureococcus anophagefferens 72304 I 0.737
eif2s1 Xenopus tropicalis ENSXETG00000011221 I 0.737
PTSG_05806 Salpingoeca rosetta PTSG_05806 I 0.737
fgenesh1_pm.C_scaffold_69000005 Phytophthora ramorum fgenesh1_pm.C_scaffold_69000005 I 0.737
PITG_07885 Phytophthora infestans PITG_07885 I 0.737
THAPSDRAFT_105 Thalassiosira pseudonana Thaps105 I 0.737
AMSG_04936 Thecamonas trahens AMSG_04936 I 0.737
CAOG_02542 Capsaspora owczarzaki CAOG_02542 I 0.731
SNOG_13280 Stagonospora nodorum SNOG_13280 I 0.724
estExt_Genewise1.C_51162 Mucor circinelloides estExt_Genewise1.C_51162 I 0.724
fgenesh1_pm.C_scaffold_10000060 Batrachochytrium dendrobatidis fgenesh1_pm.C_scaffold_10000060 I 0.724
IGS.gm_12_00191 Chlorella NC64A IGS.gm_12_00191 I 0.724
estExt_fgenesh2_pg.C_150109 Monosiga brevicollis estExt_fgenesh2_pg.C_150109 I 0.724
estExt_fgenesh2_kg.C_20112 Fragilariopsis cylindrus estExt_fgenesh2_kg.C_20112 I 0.724
e_gwW.11.341.1 Chlamydomonas reinhardtii e_gwW.11.341.1 I 0.724
estExt_fgenesh1_pg.C_210136 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_210136 I 0.724
EAT79164.1 Phaeosphaeria nodorum EAT79164.1 I 0.724
AB05699.1 Alternaria brassicicola AB05699.1 I 0.724
Kwal_15422 Kluyveromyces waltii Kwal_15422 I 0.724
PTRG_05239 Pyrenophora tritici repentis PTRG_05239 I 0.724
RO3G_12494 Rhizopus oryzae RO3G_12494 I 0.724
KLTH0B02002g Kluyveromyces thermotolerans KLTH0B02002g I 0.724
GSTUMT00002346001 Tuber melanosporum GSTUMT00002346001 I 0.724
estExt_Genewise1.C_100332 Chlorella vulgaris estExt_Genewise1.C_100332 I 0.724
estExt_Genewise1.C_110295 Coccomyxa C 169 estExt_Genewise1.C_110295 I 0.724
RO3G_13185 Rhizopus oryzae RO3G_13185 I 0.724
AFLA_020350 Aspergillus flavus CADAFLAG00003920 I 0.711
estExt_fgenesh1_pg.C_210283 Phytophthora capsici estExt_fgenesh1_pg.C_210283 I 0.711
estExt_fgenesh2_kg.C_21286 Serpula lacrymans estExt_fgenesh2_kg.C_21286 I 0.711
fgenesh1_pm.00077_#_3 Aspergillus carbonarius fgenesh1_pm.00077_#_3 I 0.711
AGR320W Ashbya gossypii AGR320W I 0.711
fgenesh_newKGs_kg.236__13__EST_ALL.fasta.Contig10263 Emiliania huxleyi fgenesh_newKGs_kg.236__13__EST_ALL.fasta.Contig10263 I 0.711
e_gww2.12.213.1 Phanerochaete chrysosporium e_gww2.12.213.1 I 0.711
estExt_fgenesh4_pg.C_220183 Volvox carteri estExt_fgenesh4_pg.C_220183 I 0.711
estExt_Genewise1.C_100122 Postia placenta estExt_Genewise1.C_100122 I 0.711
genemark.2222_g Pleurotus ostreatus genemark.2222_g I 0.711
Minc01303 Meloidogyne incognita Minc01303 I 0.711
ACLA_041660 Aspergillus clavatus CADACLAG00004024 I 0.711
ANIA_03156 Aspergillus nidulans CADANIAG00009914 I 0.711
ATEG_04051 Aspergillus terreus CADATEAG00009463 I 0.711
SPPG_00622 Spizellomyces punctatus SPPG_00622 I 0.711
XP_002492289.1 Pichia pastoris XP_002492289.1 I 0.711
PMAA_021520 Penicillium marneffei PMAA_021520 I 0.711
SAKL0G14058g Lachancea kluyveri SAKL0G14058g I 0.711
NFIA_063860 Neosartorya fischeri CADNFIAG00005762 I 0.711