PTSG_05806 (Salpingoeca rosetta)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 PTSG_05806 T59983_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
eIF-2alpha
M231_0.6 		Drosophila melanogaster WGCAUG RNAcompete
Ray et al.(2013)
RNCMPT00273 		0.816
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
PTSG_05806T0 S1 14 88

Links

Other S1 family RBPs
Other Salpingoeca rosetta RBPs

205 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GG19321 Drosophila erecta FBgn0111525 I 0.816
GI21763 Drosophila mojavensis FBgn0144493 I 0.816
GF19374 Drosophila ananassae FBgn0096384 I 0.816
GA22144-RA Drosophila pseudoobscura FBgn0082124 I 0.816
AGAP011190 Anopheles gambiae AGAP011190 I 0.816
CPIJ011194 Culex quinquefasciatus CPIJ011194 I 0.816
GL20268 Drosophila persimilis FBgn0157863 I 0.816
GM13399 Drosophila sechellia FBgn0168330 I 0.816
CpipJ_CPIJ011194 Culex pipiens CpipJ_CPIJ011194 I 0.816
BGIBMGA004302 Bombyx mori BGIBMGA004302 I 0.816
eIF-2alpha Drosophila melanogaster FBgn0261609 D 0.816
GE15968 Drosophila yakuba FBgn0233524 I 0.816
GJ19141 Drosophila virilis FBgn0206286 I 0.816
GK25248 Drosophila willistoni FBgn0227207 I 0.816
nasonia_NCBI_hmm338664 Nasonia vitripennis nasonia_NCBI_hmm338664 I 0.816
GD15749 Drosophila simulans FBgn0187410 I 0.816
amel4_ncbi_hmm23817 Apis mellifera amel4_ncbi_hmm23817 I 0.816
PASA_GEN_0500123 Daphnia pulex PASA_GEN_0500123 I 0.803
PHUM551010 Pediculus humanus PHUM551010 I 0.803
AAEL013675 Aedes aegypti AAEL013675 I 0.803
estExt_fgenesh2_pg.C_150109 Monosiga brevicollis estExt_fgenesh2_pg.C_150109 I 0.800
estExt_Genewise1Plus.C_2350006 Capitella teleta estExt_Genewise1Plus.C_2350006 I 0.800
estExt_fgenesh2_pm.C_sca_10068 Lottia gigantea estExt_fgenesh2_pm.C_sca_10068 I 0.800
KLLA0A11814g Kluyveromyces lactis KLLA0A11814g I 0.787
EIF2S1 Oryzias latipes ENSORLG00000011844 I 0.787
EIF2S1 Procavia capensis ENSPCAG00000002613 I 0.787
ENSPPYG00000005921 Pongo pygmaeus ENSPPYG00000005921 I 0.787
IF2A_RABIT Oryctolagus cuniculus ENSOCUG00000012023 I 0.787
EIF2S1 Ornithorhynchus anatinus ENSOANG00000005409 I 0.787
EIF2S1 Macaca mulatta ENSMMUG00000021419 I 0.787
EIF2S1 Microcebus murinus ENSMICG00000010793 I 0.787
EIF2S1 Pan troglodytes ENSPTRG00000006462 I 0.787
Eif2s1 Mus musculus ENSMUSG00000021116 I 0.787
EIF2S1 Monodelphis domestica ENSMODG00000009911 I 0.787
EIF2S1 Sus scrofa ENSSSCG00000002289 I 0.787
EIF2S1 Takifugu rubripes ENSTRUG00000017958 I 0.787
XP_779939.1 Strongylocentrotus purpuratus XP_779939.1 I 0.787
XP_801812.1 Strongylocentrotus purpuratus XP_801812.1 I 0.787
114622 Helobdella robusta 114622 I 0.787
EIF2S1 Tetraodon nigroviridis ENSTNIG00000012223 I 0.787
EIF2S1 Taeniopygia guttata ENSTGUG00000011542 I 0.787
EIF2S1 Sorex araneus ENSSARG00000011682 I 0.787
EIF2S1 Meleagris gallopavo ENSMGAG00000011974 I 0.787
EIF2S1 Spermophilus tridecemlineatus ENSSTOG00000001565 I 0.787
Eif2s1 Rattus norvegicus ENSRNOG00000009432 I 0.787
EIF2S1 Ochotona princeps ENSOPRG00000004520 I 0.787
XP_001176254.1 Strongylocentrotus purpuratus XP_001176254.1 I 0.787
XP_001176396.1 Strongylocentrotus purpuratus XP_001176396.1 I 0.787
LOC100399114 Callithrix jacchus ENSCJAG00000015368 I 0.787
EIF2S1 Canis familiaris ENSCAFG00000016386 I 0.787
IF2A_BOVIN Bos taurus ENSBTAG00000016311 I 0.787
EIF2S1 Loxodonta africana ENSLAFG00000013423 I 0.787
Ame_R013633 Ailuropoda melanoleuca Ame_R013633 I 0.787
EIF2S1 Anolis carolinensis ENSACAG00000005994 I 0.787
EIF2S1 Cavia porcellus ENSCPOG00000003313 I 0.787
eif2s1l Danio rerio ENSDARG00000005827 I 0.787
EIF2S1 Homo sapiens ENSG00000134001 I 0.787
EIF2S1 Echinops telfairi ENSETEG00000019003 I 0.787
EIF2S1 Gasterosteus aculeatus ENSGACG00000008569 I 0.787
IF2A_CHICK Gallus gallus ENSGALG00000009565 I 0.787
EIF2S1 Gorilla gorilla ENSGGOG00000001603 I 0.787
EIF2S1 Erinaceus europaeus ENSEEUG00000010225 I 0.787
LOC100052709 Equus caballus ENSECAG00000018424 I 0.787
eif2s1 Danio rerio ENSDARG00000052178 I 0.787
Eif2s1 Dipodomys ordii ENSDORG00000002382 I 0.787
DGIL_AUG5s12507g4t1 Acyrtosiphon pisum DGIL_AUG5s12507g4t1 I 0.776
e_gwW.11.341.1 Chlamydomonas reinhardtii e_gwW.11.341.1 I 0.776
GSTUMT00002346001 Tuber melanosporum GSTUMT00002346001 I 0.776
SAKL0G14058g Lachancea kluyveri SAKL0G14058g I 0.776
e_gw.114.57.1 Nematostella vectensis e_gw.114.57.1 I 0.776
AGR320W Ashbya gossypii AGR320W I 0.776
XP_002492289.1 Pichia pastoris XP_002492289.1 I 0.776
estExt_GenewiseH_1.C_750056 Nematostella vectensis estExt_GenewiseH_1.C_750056 I 0.776
PITG_07885 Phytophthora infestans PITG_07885 I 0.773
Q7ZTK4 Xenopus laevis Q7ZTK4 I 0.773
fgenesh_newKGs_kg.236__13__EST_ALL.fasta.Contig10263 Emiliania huxleyi fgenesh_newKGs_kg.236__13__EST_ALL.fasta.Contig10263 I 0.773
e_gw1.7.228.1 Trichoplax adhaerens e_gw1.7.228.1 I 0.773
EIF2S1 Tursiops truncatus ENSTTRG00000015806 I 0.773
XP_002156465.1 Hydra magnipapillata XP_002156465.1 I 0.773
ENSCHOG00000009030 Choloepus hoffmanni ENSCHOG00000009030 I 0.773
fgenesh1_pm.C_scaffold_69000005 Phytophthora ramorum fgenesh1_pm.C_scaffold_69000005 I 0.773
AAH46576 Xenopus laevis AAH46576 I 0.773
CAOG_02542 Capsaspora owczarzaki CAOG_02542 I 0.766
EAT79164.1 Phaeosphaeria nodorum EAT79164.1 I 0.763
estExt_fgenesh4_pg.C_220183 Volvox carteri estExt_fgenesh4_pg.C_220183 I 0.763
ZYRO0G12056g Zygosaccharomyces rouxii ZYRO0G12056g I 0.763
KLTH0B02002g Kluyveromyces thermotolerans KLTH0B02002g I 0.763
Kwal_15422 Kluyveromyces waltii Kwal_15422 I 0.763
estExt_fgenesh1_pg.C_210136 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_210136 I 0.763
AB05699.1 Alternaria brassicicola AB05699.1 I 0.763
A7TIH9_VANPO Vanderwaltozyma polyspora A7TIH9_VANPO I 0.763
Skud_Contig1955.10 Saccharomyces kudriavzevii Skud_Contig1955.10 I 0.763
ISCW017360 Ixodes scapularis ISCW017360 I 0.763
SNOG_13280 Stagonospora nodorum SNOG_13280 I 0.763
estExt_Genewise1.C_100332 Chlorella vulgaris estExt_Genewise1.C_100332 I 0.763
estExt_Genewise1.C_110295 Coccomyxa C 169 estExt_Genewise1.C_110295 I 0.763
PTRG_05239 Pyrenophora tritici repentis PTRG_05239 I 0.763
estExt_fgenesh2_pm.C_1660010 Branchiostoma floridae estExt_fgenesh2_pm.C_1660010 I 0.760
TRV_03711 Trichophyton verrucosum TRV_03711 I 0.760
ENSCHOG00000004230 Choloepus hoffmanni ENSCHOG00000004230 I 0.760
HCAG_01136 Histoplasma capsulatum HCAG_01136 I 0.760
ENSCHOG00000003744 Choloepus hoffmanni ENSCHOG00000003744 I 0.760
TESG_05324 Trichophyton tonsurans TESG_05324 I 0.760
estExt_fgenesh2_pm.C_5760005 Branchiostoma floridae estExt_fgenesh2_pm.C_5760005 I 0.760
TERG_00559 Trichophyton rubrum TERG_00559 I 0.760
Scas_Contig617.9 Saccharomyces castellii Scas_Contig617.9 I 0.760
MCYG_00123 Microsporum canis MCYG_00123 I 0.760
Scas_Contig479.2 Saccharomyces castellii Scas_Contig479.2 I 0.760
IGS.gm_12_00191 Chlorella NC64A IGS.gm_12_00191 I 0.760
72304 Aureococcus anophagefferens 72304 I 0.760
TEQG_01370 Trichophyton equinum TEQG_01370 I 0.760
MGYG_00686 Microsporum gypseum MGYG_00686 I 0.760
ARB_05709 Arthroderma benhamiae ARB_05709 I 0.760
69770 Aureococcus anophagefferens 69770 I 0.760
estExt_Genewise1Plus.C_sca_18_chr2_1_00859 Nectria haematococca estExt_Genewise1Plus.C_sca_18_chr2_1_00859 I 0.750
13294_YJR007W Saccharomyces bayanus 13294_YJR007W I 0.750
genemark.2222_g Pleurotus ostreatus genemark.2222_g I 0.750
CAGL0B03795g Candida glabrata CAGL0B03795g I 0.750
12331_YJR007W Saccharomyces paradoxus 12331_YJR007W I 0.750
12209_YJR007W Saccharomyces mikatae 12209_YJR007W I 0.750
CPAG_01889 Candida parapsilosis CPAG_01889 I 0.750
VDBG_01622 Verticillium albo atrum VDBG_01622 I 0.750
EIF2S1 Tarsius syrichta ENSTSYG00000014171 I 0.750
VDAG_01930 Verticillium dahliae VDAG_01930 I 0.750
UREG_00217 Uncinocarpus reesii UREG_00217 I 0.750
estExt_fgenesh2_kg.C_21286 Serpula lacrymans estExt_fgenesh2_kg.C_21286 I 0.750
UM01463 Ustilago maydis UM01463 I 0.750
DEHA0F26235g Debaryomyces hansenii DEHA0F26235g I 0.750
FGSG_06220 Fusarium graminearum FGSG_06220 I 0.750
GLRG_02833 Colletotrichum graminicola GLRG_02833 I 0.750
LELG_00811 Lodderomyces elongisporus LELG_00811 I 0.750
FVEG_06185 Fusarium verticillioides FVEG_06185 I 0.750
FOXG_08491 Fusarium oxysporum FOXG_08491 I 0.750
MGG_13200 Magnaporthe oryzae MGG_13200 I 0.750
CTRG_04191 Candida tropicalis CTRG_04191 I 0.750
CPSG_04829 Coccidioides posadasii CPSG_04829 I 0.750
estExt_fgenesh2_kg.C_20112 Fragilariopsis cylindrus estExt_fgenesh2_kg.C_20112 I 0.750
estExt_fgenesh1_pm.C_chr_100036 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_100036 I 0.750
YALI0B01034g Yarrowia lipolytica YALI0B01034g I 0.750
estExt_Genewise1.C_100122 Postia placenta estExt_Genewise1.C_100122 I 0.750
estExt_Genewise1.C_10111 Trichoderma reesei estExt_Genewise1.C_10111 I 0.750
estExt_Genewise1.C_100430 Trichoderma atroviride estExt_Genewise1.C_100430 I 0.750
estExt_fgenesh1_pg.C_20141 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_20141 I 0.750
BC1G_14334 Botrytis cinerea BC1G_14334 I 0.750
CLUG_04130 Candida lusitaniae CLUG_04130 I 0.750
SUI2 Saccharomyces cerevisiae YJR007W I 0.750
CIMG_00109 Coccidioides immitis CIMG_00109 I 0.750
BDBG_06604 Blastomyces dermatitidis BDBG_06604 I 0.750
e_gww2.12.213.1 Phanerochaete chrysosporium e_gww2.12.213.1 I 0.750
estExt_Genewise1.C_21511 Trichoderma virens estExt_Genewise1.C_21511 I 0.750
estExt_fgenesh1_pm.C_210071 Selaginella moellendorfii estExt_fgenesh1_pm.C_210071 I 0.747
estExt_fgenesh1_kg.C_70012 Micromonas pusilla estExt_fgenesh1_kg.C_70012 I 0.747
RO3G_12494 Rhizopus oryzae RO3G_12494 I 0.747
e_gwEuk.2.353.1 Ostreococcus lucimarinus e_gwEuk.2.353.1 I 0.747
SPPG_00622 Spizellomyces punctatus SPPG_00622 I 0.747
RO3G_13185 Rhizopus oryzae RO3G_13185 I 0.747
estExt_Genewise1.C_51162 Mucor circinelloides estExt_Genewise1.C_51162 I 0.747
estExt_fgenesh1_kg.C_130002 Sporobolomyces roseus estExt_fgenesh1_kg.C_130002 I 0.747
Cd36_06510 Candida dubliniensis Cd36_06510 I 0.737
CC1G_08524 Coprinopsis cinerea CC1G_08524 I 0.737
e_gwh1.12.106.1 Laccaria bicolor e_gwh1.12.106.1 I 0.737
estExt_fgenesh1_kg.C_10157 Myceliophthora thermophila estExt_fgenesh1_kg.C_10157 I 0.737
estExt_fgenesh2_kg.C_40048 Neurospora tetrasperma estExt_fgenesh2_kg.C_40048 I 0.737
CHGG_04762 Chaetomium globosum CHGG_04762 I 0.737
Aqu1.220878 Amphimedon queenslandica Aqu1.220878 I 0.737
PGUG_00485 Candida guilliermondii PGUG_00485 I 0.737
estExt_fgenesh2_pm.C_120283 Heterobasidion annosum estExt_fgenesh2_pm.C_120283 I 0.737
SUI2 Candida albicans orf19.6213 I 0.737
eIF2s1 Dictyostelium discoideum DDB_G0271862 I 0.737
NCU08277 Neurospora crassa NCU08277 I 0.737
estExt_fgenesh3_kg.C_30291 Neurospora discreta estExt_fgenesh3_kg.C_30291 I 0.737
e_gw1.3.2112.1 Cryphonectria parasitica e_gw1.3.2112.1 I 0.737
PMAA_021520 Penicillium marneffei PMAA_021520 I 0.737
fgenesh1_pg.scaffold_55000187 Physcomitrella patens fgenesh1_pg.scaffold_55000187 I 0.737
fgenesh1_pm.C_scaffold_10000060 Batrachochytrium dendrobatidis fgenesh1_pm.C_scaffold_10000060 I 0.737
estExt_Genewise1.C_30452 Schizophyllum commune estExt_Genewise1.C_30452 I 0.737
Pa_6_5980 Podospora anserina Pa_6_5980 I 0.737
estExt_Genewise1Plus.C_10999 Thielavia terrestris estExt_Genewise1Plus.C_10999 I 0.737
GID1.0050760 Dictyostelium purpureum GID1.0050760 I 0.737
Minc01303 Meloidogyne incognita Minc01303 I 0.733
WUBG_12485 Wuchereria bancrofti WUBG_12485 I 0.733
EIF2S1 Pteropus vampyrus ENSPVAG00000003040 I 0.733
estExt_fgenesh1_pg.C_Chr_02.00010078 Ostreococcus tauri estExt_fgenesh1_pg.C_Chr_02.00010078 I 0.733
LOAG_09556 Loa loa LOAG_09556 I 0.733
fgenesh1_pg.C_scaffold_2000543 Melampsora laricis populina fgenesh1_pg.C_scaffold_2000543 I 0.733
estExt_fgenesh1_pg.C_210283 Phytophthora capsici estExt_fgenesh1_pg.C_210283 I 0.733
Bm1_04900 Brugia malayi Bm1_04900 I 0.733
NFIA_063860 Neosartorya fischeri CADNFIAG00005762 I 0.724
ANIA_03156 Aspergillus nidulans CADANIAG00009914 I 0.724
AFLA_020350 Aspergillus flavus CADAFLAG00003920 I 0.724
ATEG_04051 Aspergillus terreus CADATEAG00009463 I 0.724
fgenesh1_pm.00077_#_3 Aspergillus carbonarius fgenesh1_pm.00077_#_3 I 0.724
EDP42051.1 Malassezia globosa EDP42051.1 I 0.724
ACLA_041660 Aspergillus clavatus CADACLAG00004024 I 0.724
estExt_Genewise1Plus.C_80350 Agaricus bisporus estExt_Genewise1Plus.C_80350 I 0.724
SS1G_13048 Sclerotinia sclerotiorum SS1G_13048 I 0.722
estExt_Genewise1Plus.C_230113 Phycomyces blakesleeanus estExt_Genewise1Plus.C_230113 I 0.720
PredSwiss_EST393.1 Pneumocystis carinii PredSwiss_EST393.1 I 0.711
PHATRDRAFT_34538 Phaeodactylum tricornutum Phatr34538 I 0.711
estExt_gwp_gw1.C_3520018 Physcomitrella patens estExt_gwp_gw1.C_3520018 I 0.711
THAPSDRAFT_105 Thalassiosira pseudonana Thaps105 I 0.711
AMSG_04936 Thecamonas trahens AMSG_04936 I 0.707
PPA05168 Pristionchus pacificus PPA05168 I 0.707
e_gw1.2.367.1 Ostreococcus RCC809 e_gw1.2.367.1 I 0.707
AFUA_3G13480 Aspergillus fumigatus CADAFUAG00005171 I 0.705