Minc01303 (Meloidogyne incognita)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 Minc01303 T61626_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
eIF-2alpha
M231_0.6 		Drosophila melanogaster WGCAUG RNAcompete
Ray et al.(2013)
RNCMPT00273 		0.763
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
Minc01303 S1 14 88

Links

Other S1 family RBPs
Other Meloidogyne incognita RBPs

198 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PPA05168 Pristionchus pacificus PPA05168 I 0.880
CBN09310 Caenorhabditis brenneri CBN09310 I 0.853
CBN03344 Caenorhabditis brenneri CBN03344 I 0.853
CRE03750 Caenorhabditis remanei CRE03750 I 0.853
Y37E3.10 Caenorhabditis elegans Y37E3.10 I 0.840
CBG22041 Caenorhabditis briggsae CBG22041 I 0.840
LOAG_09556 Loa loa LOAG_09556 I 0.813
Bm1_04900 Brugia malayi Bm1_04900 I 0.813
estExt_fgenesh2_pm.C_sca_10068 Lottia gigantea estExt_fgenesh2_pm.C_sca_10068 I 0.813
WUBG_12485 Wuchereria bancrofti WUBG_12485 I 0.813
XP_801812.1 Strongylocentrotus purpuratus XP_801812.1 I 0.800
XP_779939.1 Strongylocentrotus purpuratus XP_779939.1 I 0.800
XP_002156465.1 Hydra magnipapillata XP_002156465.1 I 0.800
XP_001176254.1 Strongylocentrotus purpuratus XP_001176254.1 I 0.800
estExt_Genewise1Plus.C_2350006 Capitella teleta estExt_Genewise1Plus.C_2350006 I 0.800
XP_001176396.1 Strongylocentrotus purpuratus XP_001176396.1 I 0.800
114622 Helobdella robusta 114622 I 0.787
e_gw1.7.228.1 Trichoplax adhaerens e_gw1.7.228.1 I 0.787
e_gw1.18.114.1 Tremella mesenterica e_gw1.18.114.1 I 0.776
ISCW017360 Ixodes scapularis ISCW017360 I 0.776
EIF2S1 Erinaceus europaeus ENSEEUG00000010225 I 0.773
LOC100052709 Equus caballus ENSECAG00000018424 I 0.773
IF2A_CHICK Gallus gallus ENSGALG00000009565 I 0.773
EIF2S1 Gasterosteus aculeatus ENSGACG00000008569 I 0.773
EIF2S1 Homo sapiens ENSG00000134001 I 0.773
EIF2S1 Echinops telfairi ENSETEG00000019003 I 0.773
LOC100399114 Callithrix jacchus ENSCJAG00000015368 I 0.773
IF2A_BOVIN Bos taurus ENSBTAG00000016311 I 0.773
EIF2S1 Anolis carolinensis ENSACAG00000005994 I 0.773
EIF2S1 Gorilla gorilla ENSGGOG00000001603 I 0.773
EIF2S1 Canis familiaris ENSCAFG00000016386 I 0.773
EIF2S1 Cavia porcellus ENSCPOG00000003313 I 0.773
eif2s1 Danio rerio ENSDARG00000052178 I 0.773
eif2s1l Danio rerio ENSDARG00000005827 I 0.773
Eif2s1 Dipodomys ordii ENSDORG00000002382 I 0.773
IF2A_RABIT Oryctolagus cuniculus ENSOCUG00000012023 I 0.773
EIF2S1 Sorex araneus ENSSARG00000011682 I 0.773
Eif2s1 Rattus norvegicus ENSRNOG00000009432 I 0.773
EIF2S1 Pan troglodytes ENSPTRG00000006462 I 0.773
EIF2S1 Sus scrofa ENSSSCG00000002289 I 0.773
EIF2S1 Spermophilus tridecemlineatus ENSSTOG00000001565 I 0.773
Ame_R013633 Ailuropoda melanoleuca Ame_R013633 I 0.773
EIF2S1 Takifugu rubripes ENSTRUG00000017958 I 0.773
EIF2S1 Taeniopygia guttata ENSTGUG00000011542 I 0.773
ENSPPYG00000005921 Pongo pygmaeus ENSPPYG00000005921 I 0.773
EIF2S1 Procavia capensis ENSPCAG00000002613 I 0.773
EIF2S1 Macaca mulatta ENSMMUG00000021419 I 0.773
EIF2S1 Microcebus murinus ENSMICG00000010793 I 0.773
EIF2S1 Meleagris gallopavo ENSMGAG00000011974 I 0.773
EIF2S1 Monodelphis domestica ENSMODG00000009911 I 0.773
Eif2s1 Mus musculus ENSMUSG00000021116 I 0.773
EIF2S1 Oryzias latipes ENSORLG00000011844 I 0.773
EIF2S1 Ochotona princeps ENSOPRG00000004520 I 0.773
EIF2S1 Ornithorhynchus anatinus ENSOANG00000005409 I 0.773
EIF2S1 Loxodonta africana ENSLAFG00000013423 I 0.773
EIF2S1 Tetraodon nigroviridis ENSTNIG00000012223 I 0.773
AAH46576 Xenopus laevis AAH46576 I 0.773
Q7ZTK4 Xenopus laevis Q7ZTK4 I 0.773
GM13399 Drosophila sechellia FBgn0168330 I 0.763
GD15749 Drosophila simulans FBgn0187410 I 0.763
GL20268 Drosophila persimilis FBgn0157863 I 0.763
GI21763 Drosophila mojavensis FBgn0144493 I 0.763
GJ19141 Drosophila virilis FBgn0206286 I 0.763
GG19321 Drosophila erecta FBgn0111525 I 0.763
GE15968 Drosophila yakuba FBgn0233524 I 0.763
e_gw.114.57.1 Nematostella vectensis e_gw.114.57.1 I 0.763
estExt_GenewiseH_1.C_750056 Nematostella vectensis estExt_GenewiseH_1.C_750056 I 0.763
eIF-2alpha Drosophila melanogaster FBgn0261609 D 0.763
GA22144-RA Drosophila pseudoobscura FBgn0082124 I 0.763
GK25248 Drosophila willistoni FBgn0227207 I 0.763
GF19374 Drosophila ananassae FBgn0096384 I 0.763
ENSCHOG00000009030 Choloepus hoffmanni ENSCHOG00000009030 I 0.760
EIF2S1 Tursiops truncatus ENSTTRG00000015806 I 0.760
estExt_fgenesh2_pg.C_150109 Monosiga brevicollis estExt_fgenesh2_pg.C_150109 I 0.760
EIF2S1 Tarsius syrichta ENSTSYG00000014171 I 0.750
BGIBMGA004302 Bombyx mori BGIBMGA004302 I 0.750
estExt_fgenesh2_kg.C_20112 Fragilariopsis cylindrus estExt_fgenesh2_kg.C_20112 I 0.750
CpipJ_CPIJ011194 Culex pipiens CpipJ_CPIJ011194 I 0.750
amel4_ncbi_hmm23817 Apis mellifera amel4_ncbi_hmm23817 I 0.750
nasonia_NCBI_hmm338664 Nasonia vitripennis nasonia_NCBI_hmm338664 I 0.750
CPIJ011194 Culex quinquefasciatus CPIJ011194 I 0.750
AGAP011190 Anopheles gambiae AGAP011190 I 0.750
DGIL_AUG5s12507g4t1 Acyrtosiphon pisum DGIL_AUG5s12507g4t1 I 0.750
PHUM551010 Pediculus humanus PHUM551010 I 0.750
UM01463 Ustilago maydis UM01463 I 0.750
MGG_13200 Magnaporthe oryzae MGG_13200 I 0.750
EIF2S1 Pteropus vampyrus ENSPVAG00000003040 I 0.747
estExt_Genewise1.C_51162 Mucor circinelloides estExt_Genewise1.C_51162 I 0.747
fgenesh1_pg.C_scaffold_2000543 Melampsora laricis populina fgenesh1_pg.C_scaffold_2000543 I 0.747
ENSCHOG00000004230 Choloepus hoffmanni ENSCHOG00000004230 I 0.747
RO3G_13185 Rhizopus oryzae RO3G_13185 I 0.747
RO3G_12494 Rhizopus oryzae RO3G_12494 I 0.747
estExt_fgenesh1_pg.C_210136 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_210136 I 0.737
estExt_Genewise1Plus.C_10999 Thielavia terrestris estExt_Genewise1Plus.C_10999 I 0.737
PredSwiss_EST393.1 Pneumocystis carinii PredSwiss_EST393.1 I 0.737
SNOG_13280 Stagonospora nodorum SNOG_13280 I 0.737
THAPSDRAFT_105 Thalassiosira pseudonana Thaps105 I 0.737
KLTH0B02002g Kluyveromyces thermotolerans KLTH0B02002g I 0.737
PASA_GEN_0500123 Daphnia pulex PASA_GEN_0500123 I 0.737
Kwal_15422 Kluyveromyces waltii Kwal_15422 I 0.737
EAT79164.1 Phaeosphaeria nodorum EAT79164.1 I 0.737
estExt_fgenesh1_kg.C_10157 Myceliophthora thermophila estExt_fgenesh1_kg.C_10157 I 0.737
NCU08277 Neurospora crassa NCU08277 I 0.737
estExt_fgenesh3_kg.C_30291 Neurospora discreta estExt_fgenesh3_kg.C_30291 I 0.737
Skud_Contig1955.10 Saccharomyces kudriavzevii Skud_Contig1955.10 I 0.737
Pa_6_5980 Podospora anserina Pa_6_5980 I 0.737
CC1G_08524 Coprinopsis cinerea CC1G_08524 I 0.737
CHGG_04762 Chaetomium globosum CHGG_04762 I 0.737
PTRG_05239 Pyrenophora tritici repentis PTRG_05239 I 0.737
AAEL013675 Aedes aegypti AAEL013675 I 0.737
AB05699.1 Alternaria brassicicola AB05699.1 I 0.737
estExt_fgenesh2_kg.C_40048 Neurospora tetrasperma estExt_fgenesh2_kg.C_40048 I 0.737
e_gwh1.12.106.1 Laccaria bicolor e_gwh1.12.106.1 I 0.737
estExt_Genewise1.C_30452 Schizophyllum commune estExt_Genewise1.C_30452 I 0.737
TEQG_01370 Trichophyton equinum TEQG_01370 I 0.733
estExt_fgenesh1_kg.C_130002 Sporobolomyces roseus estExt_fgenesh1_kg.C_130002 I 0.733
TGME49_113230 Toxoplasma gondii TGME49_113230 I 0.733
NCLIV_056550 Neospora caninum NCLIV_056550 I 0.733
69770 Aureococcus anophagefferens 69770 I 0.733
72304 Aureococcus anophagefferens 72304 I 0.733
TGGT1_089620 Toxoplasma gondii TGGT1_089620 I 0.733
TGVEG_097260 Toxoplasma gondii TGVEG_097260 I 0.733
KLLA0A11814g Kluyveromyces lactis KLLA0A11814g I 0.733
PTSG_05806 Salpingoeca rosetta PTSG_05806 I 0.733
TESG_05324 Trichophyton tonsurans TESG_05324 I 0.733
estExt_fgenesh2_pm.C_5760005 Branchiostoma floridae estExt_fgenesh2_pm.C_5760005 I 0.733
MGYG_00686 Microsporum gypseum MGYG_00686 I 0.733
HCAG_01136 Histoplasma capsulatum HCAG_01136 I 0.733
estExt_fgenesh2_pm.C_1660010 Branchiostoma floridae estExt_fgenesh2_pm.C_1660010 I 0.733
fgenesh_newKGs_kg.236__13__EST_ALL.fasta.Contig10263 Emiliania huxleyi fgenesh_newKGs_kg.236__13__EST_ALL.fasta.Contig10263 I 0.733
TRV_03711 Trichophyton verrucosum TRV_03711 I 0.733
ARB_05709 Arthroderma benhamiae ARB_05709 I 0.733
TERG_00559 Trichophyton rubrum TERG_00559 I 0.733
ENSCHOG00000003744 Choloepus hoffmanni ENSCHOG00000003744 I 0.733
IGS.gm_12_00191 Chlorella NC64A IGS.gm_12_00191 I 0.733
MCYG_00123 Microsporum canis MCYG_00123 I 0.733
CAOG_02542 Capsaspora owczarzaki CAOG_02542 I 0.727
estExt_Genewise1.C_100122 Postia placenta estExt_Genewise1.C_100122 I 0.724
estExt_Genewise1.C_10111 Trichoderma reesei estExt_Genewise1.C_10111 I 0.724
estExt_Genewise1.C_100430 Trichoderma atroviride estExt_Genewise1.C_100430 I 0.724
SAKL0G14058g Lachancea kluyveri SAKL0G14058g I 0.724
13294_YJR007W Saccharomyces bayanus 13294_YJR007W I 0.724
A7TIH9_VANPO Vanderwaltozyma polyspora A7TIH9_VANPO I 0.724
AGR320W Ashbya gossypii AGR320W I 0.724
XP_002492289.1 Pichia pastoris XP_002492289.1 I 0.724
12331_YJR007W Saccharomyces paradoxus 12331_YJR007W I 0.724
12209_YJR007W Saccharomyces mikatae 12209_YJR007W I 0.724
YALI0B01034g Yarrowia lipolytica YALI0B01034g I 0.724
estExt_Genewise1Plus.C_sca_18_chr2_1_00859 Nectria haematococca estExt_Genewise1Plus.C_sca_18_chr2_1_00859 I 0.724
EDP42051.1 Malassezia globosa EDP42051.1 I 0.724
CAGL0B03795g Candida glabrata CAGL0B03795g I 0.724
estExt_Genewise1.C_21511 Trichoderma virens estExt_Genewise1.C_21511 I 0.724
SUI2 Saccharomyces cerevisiae YJR007W I 0.724
CIMG_00109 Coccidioides immitis CIMG_00109 I 0.724
CPSG_04829 Coccidioides posadasii CPSG_04829 I 0.724
BDBG_06604 Blastomyces dermatitidis BDBG_06604 I 0.724
BC1G_14334 Botrytis cinerea BC1G_14334 I 0.724
genemark.2222_g Pleurotus ostreatus genemark.2222_g I 0.724
PHATRDRAFT_34538 Phaeodactylum tricornutum Phatr34538 I 0.724
FGSG_06220 Fusarium graminearum FGSG_06220 I 0.724
FOXG_08491 Fusarium oxysporum FOXG_08491 I 0.724
VDAG_01930 Verticillium dahliae VDAG_01930 I 0.724
VDBG_01622 Verticillium albo atrum VDBG_01622 I 0.724
UREG_00217 Uncinocarpus reesii UREG_00217 I 0.724
GLRG_02833 Colletotrichum graminicola GLRG_02833 I 0.724
FVEG_06185 Fusarium verticillioides FVEG_06185 I 0.724
e_gw1.3.2112.1 Cryphonectria parasitica e_gw1.3.2112.1 I 0.724
estExt_Genewise1Plus.C_80350 Agaricus bisporus estExt_Genewise1Plus.C_80350 I 0.724
estExt_fgenesh1_pg.C_20141 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_20141 I 0.724
e_gww2.12.213.1 Phanerochaete chrysosporium e_gww2.12.213.1 I 0.724
estExt_Genewise1.C_110295 Coccomyxa C 169 estExt_Genewise1.C_110295 I 0.724
estExt_Genewise1.C_100332 Chlorella vulgaris estExt_Genewise1.C_100332 I 0.724
ZYRO0G12056g Zygosaccharomyces rouxii ZYRO0G12056g I 0.724
estExt_fgenesh1_pm.C_chr_100036 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_100036 I 0.724
PITG_07885 Phytophthora infestans PITG_07885 I 0.720
SPPG_00622 Spizellomyces punctatus SPPG_00622 I 0.720
estExt_fgenesh1_pg.C_Chr_02.00010078 Ostreococcus tauri estExt_fgenesh1_pg.C_Chr_02.00010078 I 0.720
estExt_Genewise1Plus.C_230113 Phycomyces blakesleeanus estExt_Genewise1Plus.C_230113 I 0.720
Scas_Contig617.9 Saccharomyces castellii Scas_Contig617.9 I 0.720
fgenesh1_pm.C_scaffold_69000005 Phytophthora ramorum fgenesh1_pm.C_scaffold_69000005 I 0.720
Scas_Contig479.2 Saccharomyces castellii Scas_Contig479.2 I 0.720
fgenesh1_pm.C_scaffold_10000060 Batrachochytrium dendrobatidis fgenesh1_pm.C_scaffold_10000060 I 0.711
estExt_fgenesh4_pg.C_220183 Volvox carteri estExt_fgenesh4_pg.C_220183 I 0.711
estExt_fgenesh2_pm.C_120283 Heterobasidion annosum estExt_fgenesh2_pm.C_120283 I 0.711
Aqu1.220878 Amphimedon queenslandica Aqu1.220878 I 0.711
e_gwW.11.341.1 Chlamydomonas reinhardtii e_gwW.11.341.1 I 0.711
estExt_fgenesh2_kg.C_21286 Serpula lacrymans estExt_fgenesh2_kg.C_21286 I 0.711
PKH_021240 Plasmodium knowlesi PKH_021240 N 0.707
tif211 Schizosaccharomyces pombe SPAC3G9.09c I 0.707
SJAG_03629 Schizosaccharomyces japonicus SJAG_03629 I 0.707
SOCG_01617 Schizosaccharomyces octosporus SOCG_01617 I 0.707
SPOG_03916 Schizosaccharomyces cryophilus SPOG_03916 I 0.707
AMSG_04936 Thecamonas trahens AMSG_04936 I 0.707
PBANKA_021210 Plasmodium berghei PBANKA_021210 N 0.707
PVX_081705 Plasmodium vivax PVX_081705 N 0.707
PF07_0117 Plasmodium falciparum PF07_0117 N 0.707
PCHAS_021050 Plasmodium chabaudi PCHAS_021050 N 0.707
PY00093 Plasmodium yoelii PY00093 N 0.707