CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AAEL013675
(
Aedes aegypti
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
AAEL013675
T60122_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
eIF-2alpha
M231_0.6
Drosophila melanogaster
WGCAUG
RNAcompete
Ray et al.(2013)
RNCMPT00273
0.921
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAEL013675-PA
S1
38
113
YPAVEDVVMVNVRSIAEMGAYVYLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVVIRVDQFKGYIDLSKR
Links
Other
S1
family RBPs
Other
Aedes aegypti
RBPs
253 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CPIJ011194
Culex quinquefasciatus
CPIJ011194
I
0.974
CpipJ_CPIJ011194
Culex pipiens
CpipJ_CPIJ011194
I
0.974
AGAP011190
Anopheles gambiae
AGAP011190
I
0.961
BGIBMGA004302
Bombyx mori
BGIBMGA004302
I
0.947
amel4_ncbi_hmm23817
Apis mellifera
amel4_ncbi_hmm23817
I
0.947
nasonia_NCBI_hmm338664
Nasonia vitripennis
nasonia_NCBI_hmm338664
I
0.947
PASA_GEN_0500123
Daphnia pulex
PASA_GEN_0500123
I
0.934
PHUM551010
Pediculus humanus
PHUM551010
I
0.934
GD15749
Drosophila simulans
FBgn0187410
I
0.921
GJ19141
Drosophila virilis
FBgn0206286
I
0.921
GM13399
Drosophila sechellia
FBgn0168330
I
0.921
GI21763
Drosophila mojavensis
FBgn0144493
I
0.921
GG19321
Drosophila erecta
FBgn0111525
I
0.921
GF19374
Drosophila ananassae
FBgn0096384
I
0.921
GA22144-RA
Drosophila pseudoobscura
FBgn0082124
I
0.921
GL20268
Drosophila persimilis
FBgn0157863
I
0.921
GK25248
Drosophila willistoni
FBgn0227207
I
0.921
eIF-2alpha
Drosophila melanogaster
FBgn0261609
D
0.921
GE15968
Drosophila yakuba
FBgn0233524
I
0.921
DGIL_AUG5s12507g4t1
Acyrtosiphon pisum
DGIL_AUG5s12507g4t1
I
0.895
e_gw.114.57.1
Nematostella vectensis
e_gw.114.57.1
I
0.895
estExt_GenewiseH_1.C_750056
Nematostella vectensis
estExt_GenewiseH_1.C_750056
I
0.895
EIF2S1
Monodelphis domestica
ENSMODG00000009911
I
0.882
EIF2S1
Oryzias latipes
ENSORLG00000011844
I
0.882
EIF2S1
Ochotona princeps
ENSOPRG00000004520
I
0.882
EIF2S1
Procavia capensis
ENSPCAG00000002613
I
0.882
IF2A_RABIT
Oryctolagus cuniculus
ENSOCUG00000012023
I
0.882
ENSPPYG00000005921
Pongo pygmaeus
ENSPPYG00000005921
I
0.882
EIF2S1
Ornithorhynchus anatinus
ENSOANG00000005409
I
0.882
Eif2s1
Mus musculus
ENSMUSG00000021116
I
0.882
EIF2S1
Sus scrofa
ENSSSCG00000002289
I
0.882
EIF2S1
Takifugu rubripes
ENSTRUG00000017958
I
0.882
estExt_fgenesh2_pm.C_sca_10068
Lottia gigantea
estExt_fgenesh2_pm.C_sca_10068
I
0.882
EIF2S1
Macaca mulatta
ENSMMUG00000021419
I
0.882
EIF2S1
Tetraodon nigroviridis
ENSTNIG00000012223
I
0.882
EIF2S1
Taeniopygia guttata
ENSTGUG00000011542
I
0.882
Eif2s1
Rattus norvegicus
ENSRNOG00000009432
I
0.882
EIF2S1
Sorex araneus
ENSSARG00000011682
I
0.882
EIF2S1
Pan troglodytes
ENSPTRG00000006462
I
0.882
EIF2S1
Spermophilus tridecemlineatus
ENSSTOG00000001565
I
0.882
EIF2S1
Cavia porcellus
ENSCPOG00000003313
I
0.882
Ame_R013633
Ailuropoda melanoleuca
Ame_R013633
I
0.882
eif2s1
Danio rerio
ENSDARG00000052178
I
0.882
Eif2s1
Dipodomys ordii
ENSDORG00000002382
I
0.882
LOC100399114
Callithrix jacchus
ENSCJAG00000015368
I
0.882
EIF2S1
Canis familiaris
ENSCAFG00000016386
I
0.882
EIF2S1
Microcebus murinus
ENSMICG00000010793
I
0.882
EIF2S1
Anolis carolinensis
ENSACAG00000005994
I
0.882
IF2A_BOVIN
Bos taurus
ENSBTAG00000016311
I
0.882
LOC100052709
Equus caballus
ENSECAG00000018424
I
0.882
eif2s1l
Danio rerio
ENSDARG00000005827
I
0.882
EIF2S1
Loxodonta africana
ENSLAFG00000013423
I
0.882
EIF2S1
Gorilla gorilla
ENSGGOG00000001603
I
0.882
IF2A_CHICK
Gallus gallus
ENSGALG00000009565
I
0.882
EIF2S1
Gasterosteus aculeatus
ENSGACG00000008569
I
0.882
EIF2S1
Homo sapiens
ENSG00000134001
I
0.882
EIF2S1
Erinaceus europaeus
ENSEEUG00000010225
I
0.882
EIF2S1
Meleagris gallopavo
ENSMGAG00000011974
I
0.882
EIF2S1
Echinops telfairi
ENSETEG00000019003
I
0.882
estExt_Genewise1Plus.C_2350006
Capitella teleta
estExt_Genewise1Plus.C_2350006
I
0.868
Q7ZTK4
Xenopus laevis
Q7ZTK4
I
0.868
ENSCHOG00000009030
Choloepus hoffmanni
ENSCHOG00000009030
I
0.868
e_gw1.7.228.1
Trichoplax adhaerens
e_gw1.7.228.1
I
0.868
AAH46576
Xenopus laevis
AAH46576
I
0.868
EIF2S1
Tursiops truncatus
ENSTTRG00000015806
I
0.868
XP_779939.1
Strongylocentrotus purpuratus
XP_779939.1
I
0.855
XP_001176254.1
Strongylocentrotus purpuratus
XP_001176254.1
I
0.855
estExt_fgenesh2_pm.C_5760005
Branchiostoma floridae
estExt_fgenesh2_pm.C_5760005
I
0.855
estExt_fgenesh2_pm.C_1660010
Branchiostoma floridae
estExt_fgenesh2_pm.C_1660010
I
0.855
XP_801812.1
Strongylocentrotus purpuratus
XP_801812.1
I
0.855
ISCW017360
Ixodes scapularis
ISCW017360
I
0.855
ENSCHOG00000004230
Choloepus hoffmanni
ENSCHOG00000004230
I
0.855
XP_001176396.1
Strongylocentrotus purpuratus
XP_001176396.1
I
0.855
EIF2S1
Tarsius syrichta
ENSTSYG00000014171
I
0.855
Bm1_04900
Brugia malayi
Bm1_04900
I
0.842
WUBG_12485
Wuchereria bancrofti
WUBG_12485
I
0.842
LOAG_09556
Loa loa
LOAG_09556
I
0.842
ENSCHOG00000003744
Choloepus hoffmanni
ENSCHOG00000003744
I
0.842
XP_002156465.1
Hydra magnipapillata
XP_002156465.1
I
0.842
CAOG_02542
Capsaspora owczarzaki
CAOG_02542
I
0.833
114622
Helobdella robusta
114622
I
0.829
fgenesh1_pm.C_scaffold_10000060
Batrachochytrium dendrobatidis
fgenesh1_pm.C_scaffold_10000060
I
0.829
fgenesh1_pm.C_scaffold_69000005
Phytophthora ramorum
fgenesh1_pm.C_scaffold_69000005
I
0.829
SAKL0G14058g
Lachancea kluyveri
SAKL0G14058g
I
0.829
AGR320W
Ashbya gossypii
AGR320W
I
0.829
PITG_07885
Phytophthora infestans
PITG_07885
I
0.829
XP_002492289.1
Pichia pastoris
XP_002492289.1
I
0.829
CAGL0B03795g
Candida glabrata
CAGL0B03795g
I
0.816
ZYRO0G12056g
Zygosaccharomyces rouxii
ZYRO0G12056g
I
0.816
Kwal_15422
Kluyveromyces waltii
Kwal_15422
I
0.816
KLTH0B02002g
Kluyveromyces thermotolerans
KLTH0B02002g
I
0.816
e_gwW.11.341.1
Chlamydomonas reinhardtii
e_gwW.11.341.1
I
0.816
SPPG_00622
Spizellomyces punctatus
SPPG_00622
I
0.816
estExt_Genewise1.C_110295
Coccomyxa C 169
estExt_Genewise1.C_110295
I
0.816
KLLA0A11814g
Kluyveromyces lactis
KLLA0A11814g
I
0.816
A7TIH9_VANPO
Vanderwaltozyma polyspora
A7TIH9_VANPO
I
0.816
estExt_Genewise1.C_100332
Chlorella vulgaris
estExt_Genewise1.C_100332
I
0.816
EIF2S1
Pteropus vampyrus
ENSPVAG00000003040
I
0.816
EAT79164.1
Phaeosphaeria nodorum
EAT79164.1
I
0.803
AB05699.1
Alternaria brassicicola
AB05699.1
I
0.803
estExt_fgenesh2_kg.C_21286
Serpula lacrymans
estExt_fgenesh2_kg.C_21286
I
0.803
estExt_fgenesh1_pg.C_210283
Phytophthora capsici
estExt_fgenesh1_pg.C_210283
I
0.803
genemark.2222_g
Pleurotus ostreatus
genemark.2222_g
I
0.803
estExt_Genewise1.C_100122
Postia placenta
estExt_Genewise1.C_100122
I
0.803
fgenesh1_pg.scaffold_55000187
Physcomitrella patens
fgenesh1_pg.scaffold_55000187
I
0.803
estExt_fgenesh4_pg.C_220183
Volvox carteri
estExt_fgenesh4_pg.C_220183
I
0.803
estExt_fgenesh1_pg.C_210136
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_210136
I
0.803
CTRG_04191
Candida tropicalis
CTRG_04191
I
0.803
DEHA0F26235g
Debaryomyces hansenii
DEHA0F26235g
I
0.803
Skud_Contig1955.10
Saccharomyces kudriavzevii
Skud_Contig1955.10
I
0.803
SNOG_13280
Stagonospora nodorum
SNOG_13280
I
0.803
e_gww2.12.213.1
Phanerochaete chrysosporium
e_gww2.12.213.1
I
0.803
PTSG_05806
Salpingoeca rosetta
PTSG_05806
I
0.803
PTRG_05239
Pyrenophora tritici repentis
PTRG_05239
I
0.803
LELG_00811
Lodderomyces elongisporus
LELG_00811
I
0.803
CPAG_01889
Candida parapsilosis
CPAG_01889
I
0.803
CLUG_04130
Candida lusitaniae
CLUG_04130
I
0.803
72304
Aureococcus anophagefferens
72304
I
0.803
69770
Aureococcus anophagefferens
69770
I
0.803
Aqu1.220878
Amphimedon queenslandica
Aqu1.220878
I
0.789
estExt_fgenesh1_pm.C_210071
Selaginella moellendorfii
estExt_fgenesh1_pm.C_210071
I
0.789
estExt_gwp_gw1.C_3520018
Physcomitrella patens
estExt_gwp_gw1.C_3520018
I
0.789
Scas_Contig479.2
Saccharomyces castellii
Scas_Contig479.2
I
0.789
SUI2
Candida albicans
orf19.6213
I
0.789
fgenesh_newKGs_kg.236__13__EST_ALL.fasta.Contig10263
Emiliania huxleyi
fgenesh_newKGs_kg.236__13__EST_ALL.fasta.Contig10263
I
0.789
Scas_Contig617.9
Saccharomyces castellii
Scas_Contig617.9
I
0.789
PGUG_00485
Candida guilliermondii
PGUG_00485
I
0.789
Cd36_06510
Candida dubliniensis
Cd36_06510
I
0.789
SUI2
Saccharomyces cerevisiae
YJR007W
I
0.789
12209_YJR007W
Saccharomyces mikatae
12209_YJR007W
I
0.789
13294_YJR007W
Saccharomyces bayanus
13294_YJR007W
I
0.789
12331_YJR007W
Saccharomyces paradoxus
12331_YJR007W
I
0.789
THAPSDRAFT_105
Thalassiosira pseudonana
Thaps105
I
0.789
IGS.gm_12_00191
Chlorella NC64A
IGS.gm_12_00191
I
0.789
PredSwiss_EST393.1
Pneumocystis carinii
PredSwiss_EST393.1
I
0.789
estExt_fgenesh2_pm.C_120283
Heterobasidion annosum
estExt_fgenesh2_pm.C_120283
I
0.789
estExt_fgenesh2_pg.C_150109
Monosiga brevicollis
estExt_fgenesh2_pg.C_150109
I
0.789
RO3G_13185
Rhizopus oryzae
RO3G_13185
I
0.776
VDAG_01930
Verticillium dahliae
VDAG_01930
I
0.776
VDBG_01622
Verticillium albo atrum
VDBG_01622
I
0.776
RO3G_12494
Rhizopus oryzae
RO3G_12494
I
0.776
FOXG_08491
Fusarium oxysporum
FOXG_08491
I
0.776
BC1G_14334
Botrytis cinerea
BC1G_14334
I
0.776
BDBG_06604
Blastomyces dermatitidis
BDBG_06604
I
0.776
AMSG_04936
Thecamonas trahens
AMSG_04936
I
0.776
PMAA_021520
Penicillium marneffei
PMAA_021520
I
0.776
YALI0B01034g
Yarrowia lipolytica
YALI0B01034g
I
0.776
CC1G_08524
Coprinopsis cinerea
CC1G_08524
I
0.776
GSTUMT00002346001
Tuber melanosporum
GSTUMT00002346001
I
0.776
e_gw1.3.2112.1
Cryphonectria parasitica
e_gw1.3.2112.1
I
0.776
FVEG_06185
Fusarium verticillioides
FVEG_06185
I
0.776
CPSG_04829
Coccidioides posadasii
CPSG_04829
I
0.776
CIMG_00109
Coccidioides immitis
CIMG_00109
I
0.776
GLRG_02833
Colletotrichum graminicola
GLRG_02833
I
0.776
estExt_Genewise1.C_51162
Mucor circinelloides
estExt_Genewise1.C_51162
I
0.776
estExt_Genewise1.C_100430
Trichoderma atroviride
estExt_Genewise1.C_100430
I
0.776
estExt_fgenesh2_kg.C_20112
Fragilariopsis cylindrus
estExt_fgenesh2_kg.C_20112
I
0.776
estExt_Genewise1.C_10111
Trichoderma reesei
estExt_Genewise1.C_10111
I
0.776
estExt_Genewise1.C_21511
Trichoderma virens
estExt_Genewise1.C_21511
I
0.776
estExt_Genewise1.C_30452
Schizophyllum commune
estExt_Genewise1.C_30452
I
0.776
estExt_fgenesh1_pm.C_chr_100036
Mycosphaerella graminicola
estExt_fgenesh1_pm.C_chr_100036
I
0.776
estExt_fgenesh1_pg.C_20141
Mycosphaerella fijiensis
estExt_fgenesh1_pg.C_20141
I
0.776
eif2s1
Xenopus tropicalis
ENSXETG00000011221
I
0.776
PHATRDRAFT_34538
Phaeodactylum tricornutum
Phatr34538
I
0.776
PPA05168
Pristionchus pacificus
PPA05168
I
0.776
e_gwh1.12.106.1
Laccaria bicolor
e_gwh1.12.106.1
I
0.776
estExt_Genewise1Plus.C_sca_18_chr2_1_00859
Nectria haematococca
estExt_Genewise1Plus.C_sca_18_chr2_1_00859
I
0.776
estExt_fgenesh1_kg.C_70012
Micromonas pusilla
estExt_fgenesh1_kg.C_70012
I
0.776
NCU08277
Neurospora crassa
NCU08277
I
0.763
ANIA_03156
Aspergillus nidulans
CADANIAG00009914
I
0.763
AFLA_020350
Aspergillus flavus
CADAFLAG00003920
I
0.763
UREG_00217
Uncinocarpus reesii
UREG_00217
I
0.763
Pa_6_5980
Podospora anserina
Pa_6_5980
I
0.763
ACLA_041660
Aspergillus clavatus
CADACLAG00004024
I
0.763
estExt_fgenesh1_kg.C_130002
Sporobolomyces roseus
estExt_fgenesh1_kg.C_130002
I
0.763
NFIA_063860
Neosartorya fischeri
CADNFIAG00005762
I
0.763
eIF2s1
Dictyostelium discoideum
DDB_G0271862
I
0.763
HCAG_01136
Histoplasma capsulatum
HCAG_01136
I
0.763
estExt_fgenesh1_kg.C_10157
Myceliophthora thermophila
estExt_fgenesh1_kg.C_10157
I
0.763
estExt_fgenesh2_kg.C_40048
Neurospora tetrasperma
estExt_fgenesh2_kg.C_40048
I
0.763
e_gw1.18.114.1
Tremella mesenterica
e_gw1.18.114.1
I
0.763
estExt_Genewise1Plus.C_10999
Thielavia terrestris
estExt_Genewise1Plus.C_10999
I
0.763
ATEG_04051
Aspergillus terreus
CADATEAG00009463
I
0.763
FGSG_06220
Fusarium graminearum
FGSG_06220
I
0.763
CHGG_04762
Chaetomium globosum
CHGG_04762
I
0.763
estExt_Genewise1Plus.C_80350
Agaricus bisporus
estExt_Genewise1Plus.C_80350
I
0.763
GID1.0050760
Dictyostelium purpureum
GID1.0050760
I
0.763
estExt_fgenesh3_kg.C_30291
Neurospora discreta
estExt_fgenesh3_kg.C_30291
I
0.763
fgenesh1_pm.00077_#_3
Aspergillus carbonarius
fgenesh1_pm.00077_#_3
I
0.763
AMAG_01618
Allomyces macrogynus
AMAG_01618
I
0.750
AMAG_04113
Allomyces macrogynus
AMAG_04113
I
0.750
Y37E3.10
Caenorhabditis elegans
Y37E3.10
I
0.750
CBG22041
Caenorhabditis briggsae
CBG22041
I
0.750
Medtr3g094720
Medicago truncatula
Medtr3g094720
I
0.750
ARB_05709
Arthroderma benhamiae
ARB_05709
I
0.750
CBN03344
Caenorhabditis brenneri
CBN03344
I
0.750
MGG_13200
Magnaporthe oryzae
MGG_13200
I
0.750
TRV_03711
Trichophyton verrucosum
TRV_03711
I
0.750
TESG_05324
Trichophyton tonsurans
TESG_05324
I
0.750
UM01463
Ustilago maydis
UM01463
I
0.750
EDP42051.1
Malassezia globosa
EDP42051.1
I
0.750
estExt_Genewise1Plus.C_230113
Phycomyces blakesleeanus
estExt_Genewise1Plus.C_230113
I
0.750
TERG_00559
Trichophyton rubrum
TERG_00559
I
0.750
CBN09310
Caenorhabditis brenneri
CBN09310
I
0.750
CRE03750
Caenorhabditis remanei
CRE03750
I
0.750
MGYG_00686
Microsporum gypseum
MGYG_00686
I
0.750
TEQG_01370
Trichophyton equinum
TEQG_01370
I
0.750
estExt_fgenesh1_pg.C_Chr_02.00010078
Ostreococcus tauri
estExt_fgenesh1_pg.C_Chr_02.00010078
I
0.750
MCYG_00123
Microsporum canis
MCYG_00123
I
0.750
SS1G_13048
Sclerotinia sclerotiorum
SS1G_13048
I
0.747
AFUA_3G13480
Aspergillus fumigatus
CADAFUAG00005171
I
0.744
cassava7659.valid.m1
Manihot esculenta
cassava7659.valid.m1
I
0.737
fgenesh1_pg.C_scaffold_2000543
Melampsora laricis populina
fgenesh1_pg.C_scaffold_2000543
I
0.737
e_gwEuk.2.353.1
Ostreococcus lucimarinus
e_gwEuk.2.353.1
I
0.737
Minc01303
Meloidogyne incognita
Minc01303
I
0.737
SPOG_03916
Schizosaccharomyces cryophilus
SPOG_03916
I
0.737
cassava7658.valid.m1
Manihot esculenta
cassava7658.valid.m1
I
0.737
tif211
Schizosaccharomyces pombe
SPAC3G9.09c
I
0.737
SJAG_03629
Schizosaccharomyces japonicus
SJAG_03629
I
0.737
SOCG_01617
Schizosaccharomyces octosporus
SOCG_01617
I
0.737
BGIOSIBCE026135
Oryza indica
BGIOSIBCE026135
I
0.724
PK10564.1
Cannabis sativa
PK10564.1
I
0.724
EIF2
Arabidopsis thaliana
AT5G05470-TAIR-G
I
0.724
AT2G40290
Arabidopsis thaliana
AT2G40290-TAIR-G
I
0.724
TGME49_113230
Toxoplasma gondii
TGME49_113230
I
0.724
ppa008120m
Prunus persica
ppa008120m
I
0.724
Cucsa.239320
Cucumis sativus
Cucsa.239320
I
0.724
XM_002881666.1
Arabidopsis lyrata
fgenesh2_kg.4__2141__AT2G40290.1
I
0.724
29607.m000238
Ricinus communis
29607.m000238
I
0.724
MDP0000663428
Malus x domestica
MDP0000663428
I
0.724
LjSGA_031492.1
Lotus japonicus
LjSGA_031492.1
I
0.724
mgf006782m
Mimulus guttatus
mgf006782m
I
0.724
Glyma18g02820.1
Glycine max
Glyma18g02820.1
I
0.724
Glyma11g35600.1
Glycine max
Glyma11g35600.1
I
0.724
TGVEG_097260
Toxoplasma gondii
TGVEG_097260
I
0.724
Medtr3g094740
Medicago truncatula
Medtr3g094740
I
0.724
EFA85538.1
Polysphondylium pallidum
EFA85538.1
I
0.724
Medtr3g094730
Medicago truncatula
Medtr3g094730
I
0.724
GSVIVG00024676001
Vitis vinifera
GSVIVG00024676001
I
0.724
LOC_Os07g49220
Oryza sativa
LOC_Os07g49220
I
0.724
B9HHU6_POPTR
Populus trichocarpa
POPTR_0008s07250
I
0.724
TGGT1_089620
Toxoplasma gondii
TGGT1_089620
I
0.724
NCLIV_056550
Neospora caninum
NCLIV_056550
I
0.724
B9HSK1_POPTR
Populus trichocarpa
POPTR_0010s19230
I
0.724
GRMZM2G083262
Zea mays
GRMZM2G083262
I
0.711
GRMZM2G058138
Zea mays
GRMZM2G058138
I
0.711
BGIOSIBCE010732
Oryza indica
BGIOSIBCE010732
I
0.711
cassava16515.m1
Manihot esculenta
cassava16515.m1
I
0.711
PGTG_13830
Puccinia graminis
PGTG_13830
N
0.711
LOC_Os03g18510
Oryza sativa
LOC_Os03g18510
I
0.711
SB01G038230
Sorghum bicolor
Sb01g038230
I
0.711
MDP0000155133
Malus x domestica
MDP0000155133
I
0.711
BRADI1G16700
Brachypodium distachyon
BRADI1G16700
I
0.711