CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
e_gw1.4.4.1
(
Trichoderma reesei
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
e_gw1.4.4.1
T61037_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.4.4.1
S1
1100
1170
LCEGMIVPVNVRMVRDDFAIVKLDCGIEGRIEGHEVSNRASVKDVLSTGQTVQAKILEMNYKDFMAKLSIR
Links
Other
S1
family RBPs
Other
Trichoderma reesei
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
estExt_Genewise1.C_90896
Trichoderma virens
estExt_Genewise1.C_90896
N
0.958
e_gw1.1.40.1
Trichoderma atroviride
e_gw1.1.40.1
N
0.930
FGSG_09904
Fusarium graminearum
FGSG_09904
N
0.831
FOXG_05520
Fusarium oxysporum
FOXG_05520
N
0.803
e_gw1.5.1025.1
Nectria haematococca
e_gw1.5.1025.1
N
0.803
FVEG_02619
Fusarium verticillioides
FVEG_02619
N
0.775
Pa_2_830
Podospora anserina
Pa_2_830
N
0.761
estExt_Genewise1.C_33759
Myceliophthora thermophila
estExt_Genewise1.C_33759
N
0.746
estExt_Genewise1Plus.C_70990
Cryphonectria parasitica
estExt_Genewise1Plus.C_70990
N
0.726
genemark.2690_g
Thielavia terrestris
genemark.2690_g
N
0.718