estExt_Genewise1.C_90896 (Trichoderma virens)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 estExt_Genewise1.C_90896 T61154_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_90896 S1 1101 1171

Links

Other S1 family RBPs
Other Trichoderma virens RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.1.40.1 Trichoderma atroviride e_gw1.1.40.1 N 0.972
e_gw1.4.4.1 Trichoderma reesei e_gw1.4.4.1 N 0.958
FGSG_09904 Fusarium graminearum FGSG_09904 N 0.873
FOXG_05520 Fusarium oxysporum FOXG_05520 N 0.845
FVEG_02619 Fusarium verticillioides FVEG_02619 N 0.817
e_gw1.5.1025.1 Nectria haematococca e_gw1.5.1025.1 N 0.803
Pa_2_830 Podospora anserina Pa_2_830 N 0.775
estExt_Genewise1.C_33759 Myceliophthora thermophila estExt_Genewise1.C_33759 N 0.761
estExt_Genewise1Plus.C_70990 Cryphonectria parasitica estExt_Genewise1Plus.C_70990 N 0.740
genemark.2690_g Thielavia terrestris genemark.2690_g N 0.732
estExt_Genewise1Plus.C_90498 Neurospora tetrasperma estExt_Genewise1Plus.C_90498 N 0.708
NCU04611 Neurospora crassa NCU04611 N 0.708
estExt_Genewise1Plus.C_11025 Neurospora discreta estExt_Genewise1Plus.C_11025 N 0.708
CHGG_00532 Chaetomium globosum CHGG_00532 N 0.704