Q5F341_CHICK (Gallus gallus)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 ENSGALG00000011795 T62036_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
YTHDC1
M354_0.6 		Homo sapiens KVVURC SELEX
Cook et al.(2011)
969_20167602 		0.979
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000019221 YTH 376 472
ENSGALP00000037004 YTH 421 468

Links

Other YTH family RBPs
Other Gallus gallus RBPs

47 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
YTHDC1 Taeniopygia guttata ENSTGUG00000004452 I 1.000
YTHDC1 Meleagris gallopavo ENSMGAG00000010391 I 1.000
YTHDC1 Ornithorhynchus anatinus ENSOANG00000014398 I 0.990
YTHDC1 Otolemur garnettii ENSOGAG00000003362 I 0.990
LOC100066303 Equus caballus ENSECAG00000018303 I 0.990
Ame_R018249 Ailuropoda melanoleuca Ame_R018249 I 0.990
YTHDC1 Loxodonta africana ENSLAFG00000021592 I 0.990
YTHDC1 Canis familiaris ENSCAFG00000002821 I 0.990
YTHDC1 Oryctolagus cuniculus ENSOCUG00000015886 I 0.990
YTHDC1 Sorex araneus ENSSARG00000010960 I 0.979
YTHDC1 Cavia porcellus ENSCPOG00000010929 I 0.979
YTHDC1 Tupaia belangeri ENSTBEG00000011546 I 0.979
YTHDC1 Vicugna pacos ENSVPAG00000009040 I 0.979
Q29RQ7_BOVIN Bos taurus ENSBTAG00000015572 I 0.979
YTHDC1 Callithrix jacchus ENSCJAG00000009934 I 0.979
Ythdc1 Rattus norvegicus ENSRNOG00000001996 I 0.979
YTHDC1 Tursiops truncatus ENSTTRG00000005083 I 0.979
YTHDC1 Gorilla gorilla ENSGGOG00000021958 I 0.979
YTHDC1 Pan troglodytes ENSPTRG00000016105 I 0.979
YTHDC1 Pteropus vampyrus ENSPVAG00000015551 I 0.979
Ythdc1 Dipodomys ordii ENSDORG00000013045 I 0.979
YTHDC1 Homo sapiens ENSG00000083896 D 0.979
YTHDC1 Macaca mulatta ENSMMUG00000002265 I 0.979
Ythdc1 Mus musculus ENSMUSG00000035851 I 0.979
YTHDC1 Erinaceus europaeus ENSEEUG00000015466 I 0.979
ENSPPYG00000014726 Pongo pygmaeus ENSPPYG00000014726 I 0.979
YTHDC1 Ochotona princeps ENSOPRG00000008986 I 0.969
YTHDC1 Anolis carolinensis ENSACAG00000009697 I 0.959
ythdc1 Danio rerio ENSDARG00000051953 I 0.948
ythdc1 Xenopus tropicalis ENSXETG00000017960 I 0.948
YTHDC1 Tarsius syrichta ENSTSYG00000011668 I 0.938
AAH84321 Xenopus laevis AAH84321 I 0.928
YTHDC1 Gasterosteus aculeatus ENSGACG00000015486 I 0.897
YTHDC1 Takifugu rubripes ENSTRUG00000010142 I 0.897
ENSMODG00000020754 Monodelphis domestica ENSMODG00000020754 I 0.897
YTHDC1 Tetraodon nigroviridis ENSTNIG00000013243 I 0.887
ENSMODG00000014337 Monodelphis domestica ENSMODG00000014337 I 0.866
YTHDC1 Dasypus novemcinctus ENSDNOG00000004949 I 0.825
ENSMODG00000004117 Monodelphis domestica ENSMODG00000004117 I 0.794
ENSMODG00000010076 Monodelphis domestica ENSMODG00000010076 I 0.794
YTHDC1 Myotis lucifugus ENSMLUG00000016300 I 0.784
ENSMODG00000009173 Monodelphis domestica ENSMODG00000009173 I 0.784
amel4_ncbi_hmm4222 Apis mellifera amel4_ncbi_hmm4222 I 0.711
XP_001181366.1 Strongylocentrotus purpuratus XP_001181366.1 I 0.711
XP_783255.2 Strongylocentrotus purpuratus XP_783255.2 I 0.711
nasonia_NCBI_hmm460384 Nasonia vitripennis nasonia_NCBI_hmm460384 I 0.701
PHUM305930 Pediculus humanus PHUM305930 I 0.701