ENSMODG00000004117 (Monodelphis domestica)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 ENSMODG00000004117 T62072_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
YTHDC1
M354_0.6 		Homo sapiens KVVURC SELEX
Cook et al.(2011)
969_20167602 		0.794
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000005067 YTH 40 136

Links

Other YTH family RBPs
Other Monodelphis domestica RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSMODG00000010076 Monodelphis domestica ENSMODG00000010076 I 1.000
ENSMODG00000009173 Monodelphis domestica ENSMODG00000009173 I 0.990
Ame_R018249 Ailuropoda melanoleuca Ame_R018249 I 0.804
YTHDC1 Canis familiaris ENSCAFG00000002821 I 0.804
LOC100066303 Equus caballus ENSECAG00000018303 I 0.804
YTHDC1 Loxodonta africana ENSLAFG00000021592 I 0.804
YTHDC1 Otolemur garnettii ENSOGAG00000003362 I 0.804
YTHDC1 Tursiops truncatus ENSTTRG00000005083 I 0.804
YTHDC1 Oryctolagus cuniculus ENSOCUG00000015886 I 0.804
YTHDC1 Ornithorhynchus anatinus ENSOANG00000014398 I 0.804
Ythdc1 Mus musculus ENSMUSG00000035851 I 0.794
Q29RQ7_BOVIN Bos taurus ENSBTAG00000015572 I 0.794
YTHDC1 Ochotona princeps ENSOPRG00000008986 I 0.794
YTHDC1 Callithrix jacchus ENSCJAG00000009934 I 0.794
YTHDC1 Cavia porcellus ENSCPOG00000010929 I 0.794
YTHDC1 Homo sapiens ENSG00000083896 D 0.794
YTHDC1 Erinaceus europaeus ENSEEUG00000015466 I 0.794
YTHDC1 Gorilla gorilla ENSGGOG00000021958 I 0.794
Ythdc1 Dipodomys ordii ENSDORG00000013045 I 0.794
Q5F341_CHICK Gallus gallus ENSGALG00000011795 I 0.794
YTHDC1 Vicugna pacos ENSVPAG00000009040 I 0.794
Ythdc1 Rattus norvegicus ENSRNOG00000001996 I 0.794
YTHDC1 Pteropus vampyrus ENSPVAG00000015551 I 0.794
YTHDC1 Pan troglodytes ENSPTRG00000016105 I 0.794
ENSPPYG00000014726 Pongo pygmaeus ENSPPYG00000014726 I 0.794
YTHDC1 Sorex araneus ENSSARG00000010960 I 0.794
YTHDC1 Tupaia belangeri ENSTBEG00000011546 I 0.794
YTHDC1 Meleagris gallopavo ENSMGAG00000010391 I 0.794
YTHDC1 Macaca mulatta ENSMMUG00000002265 I 0.794
YTHDC1 Taeniopygia guttata ENSTGUG00000004452 I 0.794
YTHDC1 Anolis carolinensis ENSACAG00000009697 I 0.784
ythdc1 Xenopus tropicalis ENSXETG00000017960 I 0.784
ENSMODG00000014337 Monodelphis domestica ENSMODG00000014337 I 0.773
ythdc1 Danio rerio ENSDARG00000051953 I 0.773
AAH84321 Xenopus laevis AAH84321 I 0.763
YTHDC1 Tarsius syrichta ENSTSYG00000011668 I 0.753
ENSMODG00000020754 Monodelphis domestica ENSMODG00000020754 I 0.732
YTHDC1 Takifugu rubripes ENSTRUG00000010142 I 0.722
YTHDC1 Gasterosteus aculeatus ENSGACG00000015486 I 0.722
YTHDC1 Tetraodon nigroviridis ENSTNIG00000013243 I 0.701