CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSCAFG00000030809
(
Canis familiaris
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRMs_3D)
IPR000504
ENSCAFG00000030809
T077722_2.00
Ensembl (2018-Dec-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
JPLE
e-dist
ENSCAFG00000030809
M06049_2.00
Canis familiaris
NGURGUKK
JPLE
Sasse et al.(2025)
RM_Can.fam_ENSCAFG00000030809
0.094
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
Motifs from training set RBPs that strongly contributed to the reconstructed motif
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
e-dist (%
contribution)
SFPQ
M00190_2.00
Homo sapiens
KURRUKK
RNAcompete
Ray et al.(2013)
RNCMPT00177
0.094
(94.99%)
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCAFP00000040269
RRM
72
147
TQCSRLFVGNLPPDITKEEMRKLKYGKAGEIFIHKDKGFGFTCLETRTLAEIARVELDYMSLRGKQLRVRFACHGV
ENSCAFP00000040269
RRM
145
204
HGVSLTYVSNELLEEAFPFGQMERAVVIMDDRGRPSGKGIVEFSGKPAAWKALDCREGSF
RNA contacting residues
Links
Other
RRM
family RBPs
Other
Canis familiaris
RBPs
56 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NONO
Sorex araneus
ENSSARG00000007959
I
0.755
ENSCJAG00000036744
Callithrix jacchus
ENSCJAG00000036744
I
0.750
ENSCPOG00000010263
Cavia porcellus
ENSCPOG00000010263
I
0.750
ENSCPOG00000023605
Cavia porcellus
ENSCPOG00000023605
I
0.750
NONO
Equus caballus
ENSECAG00000008502
I
0.750
NONO
Erinaceus europaeus
ENSEEUG00000014404
I
0.750
NONO
Felis catus
ENSFCAG00000014807
I
0.750
NONO
Homo sapiens
ENSG00000147140
D
0.750
NONO
Gorilla gorilla
ENSGGOG00000006194
I
0.750
NONO
Loxodonta africana
ENSLAFG00000013422
I
0.750
NONO
Microcebus murinus
ENSMICG00000000232
I
0.750
NONO
Myotis lucifugus
ENSMLUG00000002489
I
0.750
NONO
Macaca mulatta
ENSMMUG00000020481
I
0.750
ENSMPUG00000004937
Mustela putorius furo
ENSMPUG00000004937
I
0.750
Nono
Mus musculus
ENSMUSG00000031311
I
0.750
ENSNLEG00000001278
Nomascus leucogenys
ENSNLEG00000001278
I
0.750
ENSOCUG00000021848
Oryctolagus cuniculus
ENSOCUG00000021848
I
0.750
NONO
Otolemur garnettii
ENSOGAG00000004834
I
0.750
ENSPANG00000013979
Papio anubis
ENSPANG00000013979
I
0.750
NONO
Procavia capensis
ENSPCAG00000002541
I
0.750
ENSPPYG00000020451
Pongo abelii
ENSPPYG00000020451
I
0.750
NONO
Pan troglodytes
ENSPTRG00000022010
I
0.750
NONO
Pteropus vampyrus
ENSPVAG00000016503
I
0.750
Nono
Rattus norvegicus
ENSRNOG00000003689
I
0.750
NONO
Sus scrofa
ENSSSCG00000023245
I
0.750
ENSSTOG00000015869
Ictidomys tridecemlineatus
ENSSTOG00000015869
I
0.750
NONO
Tursiops truncatus
ENSTTRG00000009605
I
0.750
NONO
Vicugna pacos
ENSVPAG00000002272
I
0.750
ENSBTAP00000016122-D1
Bos grunniens
ENSBTAP00000016122-D1
I
0.750
ENSP00000276079
Macaca fascicularis
ENSP00000276079
I
0.750
Myotis_brandtii_NONO_10007307
Myotis brandtii
Myotis_brandtii_NONO_10007307
I
0.750
ENSAMEG00000016057
Ailuropoda melanoleuca
ENSAMEG00000016057
I
0.750
NONO
Bos taurus
ENSBTAG00000012152
I
0.750
ENSCAFG00000003207
Canis familiaris
ENSCAFG00000003207
I
0.750
ENSCAFG00000017071
Canis familiaris
ENSCAFG00000017071
I
0.750
ENSDNOG00000003267
Dasypus novemcinctus
ENSDNOG00000003267
I
0.743
ENSMEUG00000004294
Macropus eugenii
ENSMEUG00000004294
I
0.743
NONO
Monodelphis domestica
ENSMODG00000004445
I
0.743
ENSOARG00000016966
Ovis aries
ENSOARG00000016966
I
0.743
ENSSHAG00000010195
Sarcophilus harrisii
ENSSHAG00000010195
I
0.743
Ogr12033
Ophisaurus gracilis
Ogr12033
I
0.743
Pvit_05344
Pogona vitticeps
Pvit_05344
I
0.743
ENSPSIG00000010678
Pelodiscus sinensis
ENSPSIG00000010678
I
0.736
Alligator_sinensis_CCG000628.3
Alligator sinensis
Alligator_sinensis_CCG000628.3
I
0.736
Cmyd_10013139
Chelonia mydas
Cmyd_10013139
I
0.736
ENSFALG00000011765
Ficedula albicollis
ENSFALG00000011765
I
0.730
NONO
Gallus gallus
ENSGALG00000005507
I
0.730
NONO
Meleagris gallopavo
ENSMGAG00000008869
I
0.730
NONO
Taeniopygia guttata
ENSTGUG00000007048
I
0.730
Afo_R007329
Aptenodytes forsteri
Afo_R007329
I
0.730
Brh_R000687
Buceros rhinoceros
Brh_R000687
I
0.730
Tal_R004102
Tyto alba
Tal_R004102
I
0.730
ENSAPLG00000002642
Anas platyrhynchos
ENSAPLG00000002642
I
0.730
NONO
Anolis carolinensis
ENSACAG00000015026
I
0.723
ENSCJAG00000003136
Callithrix jacchus
ENSCJAG00000003136
I
0.709
Gfo_R003471
Geospiza fortis
Gfo_R003471
I
0.703