ENSSHAG00000010195 (Sarcophilus harrisii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRMs_3D) IPR000504 ENSSHAG00000010195 T087313_2.00 Ensembl (2018-Dec-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID JPLE
e-dist
ENSSHAG00000010195
M24293_2.00		 Sarcophilus harrisii NGUDGKKK JPLE
Sasse et al.(2025)
RM_Sar.har_ENSSHAG00000010195 		0.070

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
NONO
M00507_2.00 		Homo sapiens Sequence logo not available GAGAGGAAC SELEX
Cook et al.(2011)
0.993
NONO
M00505_2.00 		Homo sapiens AGGGA SELEX
Cook et al.(2011)
0.993
SFPQ
M00809_2.00 		Homo sapiens UAGUG RNA-Bind-n-Seq
Dominguez et al.(2018)
0.723
SFPQ
M00808_2.00 		Homo sapiens WGUAAN RNA-Bind-n-Seq
Dominguez et al.(2018)
0.723
SFPQ
M00506_2.00 		Homo sapiens Sequence logo not available UGGAGAGGAAC SELEX
Cook et al.(2011)
0.723
SFPQ
M00190_2.00 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
0.723
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Motifs from training set RBPs that strongly contributed to the reconstructed motif

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID e-dist (%
contribution)
SFPQ
M00190_2.00 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
RNCMPT00177 		0.070
(91.37%)

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSHAP00000011879 RRM 76 152
ENSSHAP00000011879 RRM 150 218
ENSSHAP00000011880 RRM 118 155
ENSSHAP00000011880 RRM 152 220

RNA contacting residues

Links

Other RRM family RBPs
Other Sarcophilus harrisii RBPs

122 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSMEUG00000004294 Macropus eugenii ENSMEUG00000004294 I 1.000
NONO Monodelphis domestica ENSMODG00000004445 I 1.000
NONO Sus scrofa ENSSSCG00000023245 I 0.993
ENSSTOG00000015869 Ictidomys tridecemlineatus ENSSTOG00000015869 I 0.993
NONO Tursiops truncatus ENSTTRG00000009605 I 0.993
NONO Vicugna pacos ENSVPAG00000002272 I 0.993
ENSBTAP00000016122-D1 Bos grunniens ENSBTAP00000016122-D1 I 0.993
ENSP00000276079 Macaca fascicularis ENSP00000276079 I 0.993
Myotis_brandtii_NONO_10007307 Myotis brandtii Myotis_brandtii_NONO_10007307 I 0.993
ENSAMEG00000016057 Ailuropoda melanoleuca ENSAMEG00000016057 I 0.993
NONO Bos taurus ENSBTAG00000012152 I 0.993
ENSCAFG00000003207 Canis familiaris ENSCAFG00000003207 I 0.993
ENSCAFG00000017071 Canis familiaris ENSCAFG00000017071 I 0.993
ENSCJAG00000036744 Callithrix jacchus ENSCJAG00000036744 I 0.993
ENSCPOG00000010263 Cavia porcellus ENSCPOG00000010263 I 0.993
NONO Equus caballus ENSECAG00000008502 I 0.993
NONO Erinaceus europaeus ENSEEUG00000014404 I 0.993
NONO Felis catus ENSFCAG00000014807 I 0.993
NONO Homo sapiens ENSG00000147140 D 0.993
NONO Gorilla gorilla ENSGGOG00000006194 I 0.993
NONO Loxodonta africana ENSLAFG00000013422 I 0.993
NONO Microcebus murinus ENSMICG00000000232 I 0.993
NONO Myotis lucifugus ENSMLUG00000002489 I 0.993
NONO Macaca mulatta ENSMMUG00000020481 I 0.993
ENSMPUG00000004937 Mustela putorius furo ENSMPUG00000004937 I 0.993
Nono Mus musculus ENSMUSG00000031311 I 0.993
ENSNLEG00000001278 Nomascus leucogenys ENSNLEG00000001278 I 0.993
ENSOCUG00000021848 Oryctolagus cuniculus ENSOCUG00000021848 I 0.993
NONO Otolemur garnettii ENSOGAG00000004834 I 0.993
ENSPANG00000013979 Papio anubis ENSPANG00000013979 I 0.993
NONO Procavia capensis ENSPCAG00000002541 I 0.993
ENSPPYG00000020451 Pongo abelii ENSPPYG00000020451 I 0.993
NONO Pan troglodytes ENSPTRG00000022010 I 0.993
NONO Pteropus vampyrus ENSPVAG00000016503 I 0.993
Nono Rattus norvegicus ENSRNOG00000003689 I 0.993
Cmyd_10013139 Chelonia mydas Cmyd_10013139 I 0.986
Ogr12033 Ophisaurus gracilis Ogr12033 I 0.986
Pvit_05344 Pogona vitticeps Pvit_05344 I 0.986
ENSPSIG00000010678 Pelodiscus sinensis ENSPSIG00000010678 I 0.986
ENSOARG00000016966 Ovis aries ENSOARG00000016966 I 0.986
NONO Sorex araneus ENSSARG00000007959 I 0.986
NONO Taeniopygia guttata ENSTGUG00000007048 I 0.980
Afo_R007329 Aptenodytes forsteri Afo_R007329 I 0.980
Alligator_sinensis_CCG000628.3 Alligator sinensis Alligator_sinensis_CCG000628.3 I 0.980
Brh_R000687 Buceros rhinoceros Brh_R000687 I 0.980
Tal_R004102 Tyto alba Tal_R004102 I 0.980
ENSAPLG00000002642 Anas platyrhynchos ENSAPLG00000002642 I 0.980
ENSDNOG00000003267 Dasypus novemcinctus ENSDNOG00000003267 I 0.980
ENSFALG00000011765 Ficedula albicollis ENSFALG00000011765 I 0.980
NONO Gallus gallus ENSGALG00000005507 I 0.980
NONO Meleagris gallopavo ENSMGAG00000008869 I 0.980
ENSCPOG00000023605 Cavia porcellus ENSCPOG00000023605 I 0.973
NONO Anolis carolinensis ENSACAG00000015026 I 0.959
Gfo_R003471 Geospiza fortis Gfo_R003471 I 0.939
ENSCHOG00000002343 Choloepus hoffmanni ENSCHOG00000002343 I 0.935
NONO Echinops telfairi ENSETEG00000013823 I 0.935
ENSCJAG00000003136 Callithrix jacchus ENSCJAG00000003136 I 0.932
Aan_R015248 Calypte anna Aan_R015248 I 0.919
nono Xenopus tropicalis XB-GENE-1002494 I 0.846
nono.L Xenopus laevis XB-GENE-1002501 I 0.838
ENSCAFG00000013766 Canis familiaris ENSCAFG00000013766 I 0.838
ENSLACG00000000598 Latimeria chalumnae ENSLACG00000000598 I 0.831
ENSCPOG00000026604 Cavia porcellus ENSCPOG00000026604 I 0.752
sfpq Xenopus tropicalis XB-GENE-5968416 I 0.750
ENSLOCG00000014739 Lepisosteus oculatus ENSLOCG00000014739 I 0.750
ENSCAFG00000030809 Canis familiaris ENSCAFG00000030809 I 0.743
ENSLACG00000014728 Latimeria chalumnae ENSLACG00000014728 I 0.740
sfpq Takifugu rubripes ENSTRUG00000003783 I 0.736
Myotis_brandtii_SFPQ_10028873 Myotis brandtii Myotis_brandtii_SFPQ_10028873 I 0.730
ENSLOCG00000001067 Lepisosteus oculatus ENSLOCG00000001067 I 0.730
ENSMLUG00000027090 Myotis lucifugus ENSMLUG00000027090 I 0.730
ENSSTOG00000014004 Ictidomys tridecemlineatus ENSSTOG00000014004 I 0.723
SFPQ Tursiops truncatus ENSTTRG00000013930 I 0.723
SFPQ Vicugna pacos ENSVPAG00000006960 I 0.723
Cmyd_10015354 Chelonia mydas Cmyd_10015354 I 0.723
ENSP00000349748-D1 Bos grunniens ENSP00000349748-D1 I 0.723
Pvit_19348 Pogona vitticeps Pvit_19348 I 0.723
ENSAMEG00000000815 Ailuropoda melanoleuca ENSAMEG00000000815 I 0.723
SFPQ Bos taurus ENSBTAG00000016328 I 0.723
ENSCAFG00000003595 Canis familiaris ENSCAFG00000003595 I 0.723
ENSCJAG00000001431 Callithrix jacchus ENSCJAG00000001431 I 0.723
ENSCPOG00000015018 Cavia porcellus ENSCPOG00000015018 I 0.723
ENSCSAG00000001082 Chlorocebus sabaeus ENSCSAG00000001082 I 0.723
SFPQ Dasypus novemcinctus ENSDNOG00000049454 I 0.723
ENSECAG00000000642 Equus caballus ENSECAG00000000642 I 0.723
SFPQ Echinops telfairi ENSETEG00000001095 I 0.723
ENSFCAG00000031287 Felis catus ENSFCAG00000031287 I 0.723
SFPQ Homo sapiens ENSG00000116560 D 0.723
SFPQ Gorilla gorilla ENSGGOG00000026354 I 0.723
SFPQ Loxodonta africana ENSLAFG00000015951 I 0.723
ENSMICG00000011755 Microcebus murinus ENSMICG00000011755 I 0.723
Sfpq Mus musculus ENSMUSG00000028820 I 0.723
ENSNLEG00000010868 Nomascus leucogenys ENSNLEG00000010868 I 0.723
ENSOARG00000019439 Ovis aries ENSOARG00000019439 I 0.723
SFPQ Oryctolagus cuniculus ENSOCUG00000001877 I 0.723
SFPQ Otolemur garnettii ENSOGAG00000027710 I 0.723
SFPQ Ochotona princeps ENSOPRG00000013696 I 0.723
ENSPANG00000005380 Papio anubis ENSPANG00000005380 I 0.723
SFPQ Procavia capensis ENSPCAG00000006164 I 0.723
ENSPPYG00000001560 Pongo abelii ENSPPYG00000001560 I 0.723
ENSPSIG00000011494 Pelodiscus sinensis ENSPSIG00000011494 I 0.723
SFPQ Pan troglodytes ENSPTRG00000000518 I 0.723
Sfpq Rattus norvegicus ENSRNOG00000058461 I 0.723
ENSSHAG00000016107 Sarcophilus harrisii ENSSHAG00000016107 I 0.716
ENSTGUG00000001722 Taeniopygia guttata ENSTGUG00000001722 I 0.716
Aan_R015520 Calypte anna Aan_R015520 I 0.716
Afo_R013931 Aptenodytes forsteri Afo_R013931 I 0.716
Brh_R010044 Buceros rhinoceros Brh_R010044 I 0.716
Gfo_R008467 Geospiza fortis Gfo_R008467 I 0.716
Tal_R009770 Tyto alba Tal_R009770 I 0.716
pspc1 Xenopus tropicalis XB-GENE-492866 I 0.716
ENSAPLG00000003643 Anas platyrhynchos ENSAPLG00000003643 I 0.716
ENSMEUG00000014082 Macropus eugenii ENSMEUG00000014082 I 0.716
SFPQ Monodelphis domestica ENSMODG00000017937 I 0.716
Alligator_sinensis_CCG014919.3 Alligator sinensis Alligator_sinensis_CCG014919.3 I 0.709
ENSAMXG00000011538 Astyanax mexicanus ENSAMXG00000011538 I 0.709
nono Danio rerio ENSDARG00000020482 I 0.709
SFPQ Gallus gallus ENSGALG00000002514 I 0.709
ENSAMXG00000006846 Astyanax mexicanus ENSAMXG00000006846 I 0.703
Sfpq Dipodomys ordii ENSDORG00000008109 I 0.703
ENSGMOG00000011950 Gadus morhua ENSGMOG00000011950 I 0.702
ENSSARG00000006409 Sorex araneus ENSSARG00000006409 I 0.701