ENSCPOG00000026604 (Cavia porcellus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRMs_3D) IPR000504 ENSCPOG00000026604 T078468_2.00 Ensembl (2018-Dec-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID JPLE
e-dist
ENSCPOG00000026604
M06703_2.00		 Cavia porcellus NGURGUKK JPLE
Sasse et al.(2025)
RM_Cav.por_ENSCPOG00000026604 		0.106

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
NONO
M00507_2.00 		Homo sapiens Sequence logo not available GAGAGGAAC SELEX
Cook et al.(2011)
0.740
NONO
M00505_2.00 		Homo sapiens AGGGA SELEX
Cook et al.(2011)
0.740
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Motifs from training set RBPs that strongly contributed to the reconstructed motif

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID e-dist (%
contribution)
SFPQ
M00190_2.00 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
RNCMPT00177 		0.106
(96.67%)

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000018462 RRM 81 150
ENSCPOP00000018462 RRM 147 213

RNA contacting residues

Links

Other RRM family RBPs
Other Cavia porcellus RBPs

57 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSOARG00000016966 Ovis aries ENSOARG00000016966 I 0.765
ENSDNOG00000003267 Dasypus novemcinctus ENSDNOG00000003267 I 0.764
ENSCJAG00000036744 Callithrix jacchus ENSCJAG00000036744 I 0.759
NONO Equus caballus ENSECAG00000008502 I 0.758
NONO Erinaceus europaeus ENSEEUG00000014404 I 0.758
NONO Felis catus ENSFCAG00000014807 I 0.758
NONO Homo sapiens ENSG00000147140 D 0.758
NONO Gorilla gorilla ENSGGOG00000006194 I 0.758
NONO Loxodonta africana ENSLAFG00000013422 I 0.758
NONO Microcebus murinus ENSMICG00000000232 I 0.758
NONO Myotis lucifugus ENSMLUG00000002489 I 0.758
NONO Macaca mulatta ENSMMUG00000020481 I 0.758
ENSMPUG00000004937 Mustela putorius furo ENSMPUG00000004937 I 0.758
Nono Mus musculus ENSMUSG00000031311 I 0.758
ENSNLEG00000001278 Nomascus leucogenys ENSNLEG00000001278 I 0.758
ENSOCUG00000021848 Oryctolagus cuniculus ENSOCUG00000021848 I 0.758
NONO Otolemur garnettii ENSOGAG00000004834 I 0.758
ENSPANG00000013979 Papio anubis ENSPANG00000013979 I 0.758
NONO Procavia capensis ENSPCAG00000002541 I 0.758
ENSPPYG00000020451 Pongo abelii ENSPPYG00000020451 I 0.758
NONO Pan troglodytes ENSPTRG00000022010 I 0.758
NONO Pteropus vampyrus ENSPVAG00000016503 I 0.758
Nono Rattus norvegicus ENSRNOG00000003689 I 0.758
NONO Sus scrofa ENSSSCG00000023245 I 0.758
ENSSTOG00000015869 Ictidomys tridecemlineatus ENSSTOG00000015869 I 0.758
NONO Tursiops truncatus ENSTTRG00000009605 I 0.758
NONO Vicugna pacos ENSVPAG00000002272 I 0.758
ENSBTAP00000016122-D1 Bos grunniens ENSBTAP00000016122-D1 I 0.758
ENSP00000276079 Macaca fascicularis ENSP00000276079 I 0.758
Myotis_brandtii_NONO_10007307 Myotis brandtii Myotis_brandtii_NONO_10007307 I 0.758
ENSAMEG00000016057 Ailuropoda melanoleuca ENSAMEG00000016057 I 0.758
NONO Bos taurus ENSBTAG00000012152 I 0.758
ENSCAFG00000003207 Canis familiaris ENSCAFG00000003207 I 0.758
ENSCAFG00000017071 Canis familiaris ENSCAFG00000017071 I 0.758
ENSCPOG00000010263 Cavia porcellus ENSCPOG00000010263 I 0.758
NONO Anolis carolinensis ENSACAG00000015026 I 0.753
ENSMEUG00000004294 Macropus eugenii ENSMEUG00000004294 I 0.752
NONO Monodelphis domestica ENSMODG00000004445 I 0.752
NONO Sorex araneus ENSSARG00000007959 I 0.752
ENSSHAG00000010195 Sarcophilus harrisii ENSSHAG00000010195 I 0.752
ENSCPOG00000023605 Cavia porcellus ENSCPOG00000023605 I 0.752
ENSPSIG00000010678 Pelodiscus sinensis ENSPSIG00000010678 I 0.745
Cmyd_10013139 Chelonia mydas Cmyd_10013139 I 0.745
Ogr12033 Ophisaurus gracilis Ogr12033 I 0.745
Pvit_05344 Pogona vitticeps Pvit_05344 I 0.745
ENSFALG00000011765 Ficedula albicollis ENSFALG00000011765 I 0.738
NONO Gallus gallus ENSGALG00000005507 I 0.738
NONO Meleagris gallopavo ENSMGAG00000008869 I 0.738
NONO Taeniopygia guttata ENSTGUG00000007048 I 0.738
Afo_R007329 Aptenodytes forsteri Afo_R007329 I 0.738
Alligator_sinensis_CCG000628.3 Alligator sinensis Alligator_sinensis_CCG000628.3 I 0.738
Brh_R000687 Buceros rhinoceros Brh_R000687 I 0.738
Tal_R004102 Tyto alba Tal_R004102 I 0.738
ENSAPLG00000002642 Anas platyrhynchos ENSAPLG00000002642 I 0.738
ENSCJAG00000003136 Callithrix jacchus ENSCJAG00000003136 I 0.735
Aan_R015248 Calypte anna Aan_R015248 I 0.711
Gfo_R003471 Geospiza fortis Gfo_R003471 I 0.709