CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MCYG_05740
(
Microsporum canis
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
MCYG_05740
T01446_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MCYG_05740T0
CCCH ZF
41
66
SDVPVCKAYREGHCPLGPLCSERHPT
MCYG_05740T0
CCCH ZF
87
109
LVCKHYLKGLCKKGLKCEYLHEY
MCYG_05740T0
CCCH ZF
112
138
RRMPECQSFSRNGFCPNGDDCLYQHLS
MCYG_05740T0
CCCH ZF
142
161
KLPQCEHYDKGFCPLGPICA
MCYG_05740T0
CCCH ZF
166
186
RRKMCRFYLAGFCPAGKSCTE
Links
Other
CCCH ZF
family RBPs
Other
Microsporum canis
RBPs
23 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ARB_00210
Arthroderma benhamiae
ARB_00210
N
0.966
BDBG_04496
Blastomyces dermatitidis
BDBG_04496
N
0.721
ACLA_031620
Aspergillus clavatus
CADACLAG00003000
N
0.736
AFLA_080640
Aspergillus flavus
CADAFLAG00000846
N
0.765
AFUA_1G02810
Aspergillus fumigatus
CADAFUAG00008733
N
0.736
An01g05350
Aspergillus niger
CADANGAG00000527
N
0.752
ANIA_00298
Aspergillus nidulans
CADANIAG00002417
N
0.727
AO090005000813
Aspergillus oryzae
CADAORAG00002768
N
0.765
ATEG_01945
Aspergillus terreus
CADATEAG00008580
N
0.769
NFIA_021820
Neosartorya fischeri
CADNFIAG00001277
N
0.744
CIMG_04751
Coccidioides immitis
CIMG_04751
N
0.777
CPSG_07754
Coccidioides posadasii
CPSG_07754
N
0.769
gw1.00129.565.1
Aspergillus carbonarius
gw1.00129.565.1
N
0.744
HCAG_04743
Histoplasma capsulatum
HCAG_04743
N
0.721
MGYG_02843
Microsporum gypseum
MGYG_02843
N
0.966
PABG_06223
Paracoccidioides brasiliensis
PABG_06223
N
0.730
Pc22g25210
Penicillium chrysogenum
Pc22g25210
N
0.744
PMAA_051450
Penicillium marneffei
PMAA_051450
N
0.702
TEQG_00763
Trichophyton equinum
TEQG_00763
N
0.966
TERG_06924
Trichophyton rubrum
TERG_06924
N
0.966
TESG_04667
Trichophyton tonsurans
TESG_04667
N
0.906
TRV_05203
Trichophyton verrucosum
TRV_05203
N
0.966
UREG_06760
Uncinocarpus reesii
UREG_06760
N
0.769