PTRG_00525 (Pyrenophora tritici repentis)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 PTRG_00525 T01521_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PTRT_00525 CCCH ZF 92 117
PTRT_00525 CCCH ZF 186 206

Links

Other CCCH ZF family RBPs
Other Pyrenophora tritici repentis RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL010535 Aedes aegypti AAEL010535 N 0.000
AGAP008634 Anopheles gambiae AGAP008634 N 0.000
estExt_Genewise1.C_350015 Capitella teleta estExt_Genewise1.C_350015 N 0.702
e_gw1.132.32.1 Postia placenta e_gw1.132.32.1 N 0.702
CG8635 Drosophila melanogaster FBgn0033317 N 0.702
GA21225-RA Drosophila pseudoobscura FBgn0081213 N 0.702
GF12572 Drosophila ananassae FBgn0089609 N 0.702
GG10627 Drosophila erecta FBgn0102935 N 0.702
GH21804 Drosophila grimshawi FBgn0129265 N 0.702
GI20775 Drosophila mojavensis FBgn0143510 N 0.702
GL11672 Drosophila persimilis FBgn0149281 N 0.702
GM20672 Drosophila sechellia FBgn0175554 N 0.702
GJ20510 Drosophila virilis FBgn0207650 N 0.702
GE22859 Drosophila yakuba FBgn0240063 N 0.702
Sjc_0049010 Schistosoma japonicum Sjc_0049010 N 0.723
Smp_099900 Schistosoma mansoni Smp_099900 N 0.745
XP_001191490.1 Strongylocentrotus purpuratus XP_001191490.1 N 0.745
XP_785608.2 Strongylocentrotus purpuratus XP_785608.2 N 0.745