TRMT1 (Procavia capensis)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSPCAG00000003698 T03166_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000003517 CCCH ZF 600 625

Links

Other CCCH ZF family RBPs
Other Procavia capensis RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH44032 Xenopus laevis AAH44032 I 0.000
Ame_R015025 Ailuropoda melanoleuca Ame_R015025 I 0.000
U2AF2 Anolis carolinensis ENSACAG00000015489 I 0.000
Q24JZ8_BOVIN Bos taurus ENSBTAG00000002830 I 0.000
U2AF2 Canis familiaris ENSCAFG00000002551 I 0.000
LOC100400743 Callithrix jacchus ENSCJAG00000017128 I 0.000
U2AF2 Cavia porcellus ENSCPOG00000001582 I 0.000
u2af2b Danio rerio ENSDARG00000011740 I 0.000
u2af2a Danio rerio ENSDARG00000012505 I 0.000
U2af2 Dipodomys ordii ENSDORG00000003250 I 0.000
LOC100050729 Equus caballus ENSECAG00000010110 I 0.000
U2AF2 Homo sapiens ENSG00000063244 D 0.000
U2AF2 Gasterosteus aculeatus ENSGACG00000010632 I 0.000
ENSGACG00000014500 Gasterosteus aculeatus ENSGACG00000014500 I 0.000
ENSLAFG00000018056 Loxodonta africana ENSLAFG00000018056 I 0.000
ENSMMUG00000004810 Macaca mulatta ENSMMUG00000004810 I 0.000
XM_001119590.1 Macaca mulatta ENSMMUG00000019197 I 0.000
U2af2 Mus musculus ENSMUSG00000030435 I 0.000
U2AF2 Oryzias latipes ENSORLG00000011545 I 0.000
ENSPCAG00000014399 Procavia capensis ENSPCAG00000014399 N 0.000
ENSPPYG00000010429 Pongo pygmaeus ENSPPYG00000010429 N 0.000
U2AF2 Pan troglodytes ENSPTRG00000011523 I 0.000
U2AF2 Pteropus vampyrus ENSPVAG00000004540 I 0.000
LOC690372 Rattus norvegicus ENSRNOG00000015914 I 0.000
U2AF2 Tetraodon nigroviridis ENSTNIG00000008106 I 0.000
ENSTNIG00000011257 Tetraodon nigroviridis ENSTNIG00000011257 I 0.000
U2AF2 Takifugu rubripes ENSTRUG00000005514 I 0.000
ENSTRUG00000006885 Takifugu rubripes ENSTRUG00000006885 I 0.000
U2AF2 Tarsius syrichta ENSTSYG00000007432 N 0.000
U2AF2 Tursiops truncatus ENSTTRG00000000987 I 0.000
u2af2 Xenopus tropicalis ENSXETG00000019128 I 0.000
SNAP_00000255 Daphnia pulex SNAP_00000255 N 0.000