estExt_fgenesh1_pg.C_1320011 (Capitella teleta)
CCHC ZF,KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00013 (KH_1) 		IPR001878
IPR018111 		estExt_fgenesh1_pg.C_1320011 T07039_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_1320011 KH 162 245
estExt_fgenesh1_pg.C_1320011 CCHC ZF 300 317

Links

Other CCHC ZF,KH family RBPs
Other Capitella teleta RBPs

48 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
71408 Helobdella robusta 71408 N 0.731
AAH46717 Xenopus laevis AAH46717 N 0.725
AAI10719 Xenopus laevis AAI10719 N 0.725
Ame_R004551 Ailuropoda melanoleuca Ame_R004551 N 0.745
BGIBMGA013450 Bombyx mori BGIBMGA013450 N 0.863
SF1 Anolis carolinensis ENSACAG00000016404 N 0.745
SF1 Bos taurus ENSBTAG00000001035 N 0.745
SF1 Canis familiaris ENSCAFG00000014239 N 0.745
SF1 Choloepus hoffmanni ENSCHOG00000006008 N 0.745
ENSCING00000005564 Ciona intestinalis ENSCING00000005564 N 0.712
B0KWK3_CALJA Callithrix jacchus ENSCJAG00000002780 N 0.745
SF1 Cavia porcellus ENSCPOG00000012290 N 0.745
ENSCSAVG00000009055 Ciona savignyi ENSCSAVG00000009055 N 0.702
sf1 Danio rerio ENSDARG00000008188 N 0.725
Sf1 Dipodomys ordii ENSDORG00000016334 N 0.745
SF1 Equus caballus ENSECAG00000024544 N 0.745
SF1 Erinaceus europaeus ENSEEUG00000001058 N 0.745
SF1 Echinops telfairi ENSETEG00000012830 N 0.745
SF1 Felis catus ENSFCAG00000012231 N 0.745
SF1 Homo sapiens ENSG00000168066 N 0.745
SF1 Gasterosteus aculeatus ENSGACG00000000826 N 0.725
SF1 Gorilla gorilla ENSGGOG00000012733 N 0.745
SF1 Loxodonta africana ENSLAFG00000007201 N 0.745
SF1 Macropus eugenii ENSMEUG00000013424 N 0.745
SF1 Microcebus murinus ENSMICG00000001202 N 0.745
SF1 Myotis lucifugus ENSMLUG00000015217 N 0.745
SF1 Macaca mulatta ENSMMUG00000022606 N 0.745
Sf1 Mus musculus ENSMUSG00000024949 N 0.755
SF1 Ornithorhynchus anatinus ENSOANG00000002909 N 0.745
B7NZI1_RABIT Oryctolagus cuniculus ENSOCUG00000026486 N 0.745
SF1 Ochotona princeps ENSOPRG00000005008 N 0.745
SF1 Oryzias latipes ENSORLG00000011853 N 0.725
SF1 Procavia capensis ENSPCAG00000013631 N 0.745
ENSPPYG00000003098 Pongo pygmaeus ENSPPYG00000003098 N 0.745
SF1 Pan troglodytes ENSPTRG00000003846 N 0.745
SF1 Pteropus vampyrus ENSPVAG00000016938 N 0.745
Sf1 Rattus norvegicus ENSRNOG00000021085 N 0.745
SF1 Sus scrofa ENSSSCG00000013021 N 0.745
SF1 Tupaia belangeri ENSTBEG00000013133 N 0.745
SF1 Tetraodon nigroviridis ENSTNIG00000004820 N 0.725
SF1 Tursiops truncatus ENSTTRG00000008857 N 0.745
sf1 Xenopus tropicalis ENSXETG00000008434 N 0.735
SF1 Drosophila melanogaster FBgn0025571 N 0.798
GA19167-RA Drosophila pseudoobscura FBgn0079164 N 0.798
LOAG_00808 Loa loa LOAG_00808 N 0.757
Minc06531 Meloidogyne incognita Minc06531 N 0.748
Minc19096 Meloidogyne incognita Minc19096 N 0.713
WUBG_05719 Wuchereria bancrofti WUBG_05719 N 0.748