LOC100049989 (Equus caballus)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		ENSECAG00000012174 T07234_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ZCRB1
M085_0.6 		Homo sapiens GRHUUAA RNAcompete
Ray et al.(2013)
RNCMPT00087 		0.989
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000010101 RRM 12 82
ENSECAP00000010101 CCHC ZF 105 122

Links

Other CCHC ZF,RRM family RBPs
Other Equus caballus RBPs

45 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29577.m000447 Ricinus communis 29577.m000447 N 0.000
Glyma11g13490.1 Glycine max Glyma11g13490.1 N 0.000
Glyma12g05490.1 Glycine max Glyma12g05490.1 N 0.000
Glyma13g42060.1 Glycine max Glyma13g42060.1 N 0.000
GSVIVG00010842001 Vitis vinifera GSVIVG00010842001 N 0.000
MDP0000252655 Malus x domestica MDP0000252655 N 0.000
Medtr4g092490 Medicago truncatula Medtr4g092490 N 0.000
PK10508.1 Cannabis sativa PK10508.1 N 0.000
ppa000835m Prunus persica ppa000835m N 0.000