ZCRB1 (Homo sapiens)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		ENSG00000139168 T07244_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ZCRB1
M085_0.6		 Homo sapiens GRHUUAA RNAcompete
Ray et al.(2013)
RNCMPT00087 		(Direct)

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M085_0.6 RRM 12 82
M085_0.6 CCHC ZF 105 122

RNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000266529 RRM 12 82
ENSP00000266529 CCHC ZF 105 122

Links

Other CCHC ZF,RRM family RBPs
Other Homo sapiens RBPs

45 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH75189 Xenopus laevis AAH75189 I 0.854
Ame_R009995 Ailuropoda melanoleuca Ame_R009995 I 1.000
DGIL_AUG5s13030g1t1 Acyrtosiphon pisum DGIL_AUG5s13030g1t1 N 0.000
ZCRB1 Anolis carolinensis ENSACAG00000003172 I 0.955
ZCRB1_BOVIN Bos taurus ENSBTAG00000019119 I 0.989
ZCRB1 Canis familiaris ENSCAFG00000009788 I 0.989
LOC100410115 Callithrix jacchus ENSCJAG00000017749 I 1.000
ZCRB1 Cavia porcellus ENSCPOG00000014554 I 1.000
zcrb1 Danio rerio ENSDARG00000045691 I 0.775
LOC100049989 Equus caballus ENSECAG00000012174 I 0.989
ZCRB1 Erinaceus europaeus ENSEEUG00000000397 I 0.865
ZCRB1 Gallus gallus ENSGALG00000009544 I 0.944
ZCRB1 Gorilla gorilla ENSGGOG00000015647 I 1.000
ZCRB1 Loxodonta africana ENSLAFG00000008847 I 0.978
ZCRB1 Meleagris gallopavo ENSMGAG00000009450 I 0.944
ZCRB1 Microcebus murinus ENSMICG00000017422 I 0.888
XM_001371517.1 Monodelphis domestica ENSMODG00000006493 I 0.944
ENSMODG00000008893 Monodelphis domestica ENSMODG00000008893 I 0.944
Zcrb1 Mus musculus ENSMUSG00000022635 I 0.989
ZCRB1 Ornithorhynchus anatinus ENSOANG00000009891 I 0.933
ENSOCUG00000026539 Oryctolagus cuniculus ENSOCUG00000026539 I 0.989
ZCRB1 Oryzias latipes ENSORLG00000013088 I 0.843
ZCRB1 Procavia capensis ENSPCAG00000011749 I 0.944
ENSPPYG00000004422 Pongo pygmaeus ENSPPYG00000004422 I 1.000
ZCRB1 Pan troglodytes ENSPTRG00000004838 I 1.000
ZCRB1 Pteropus vampyrus ENSPVAG00000006651 I 0.888
Zcrb1 Rattus norvegicus ENSRNOG00000004996 I 0.989
ZCRB1 Spermophilus tridecemlineatus ENSSTOG00000007241 I 0.888
ZCRB1 Taeniopygia guttata ENSTGUG00000005829 I 0.944
ZCRB1 Tetraodon nigroviridis ENSTNIG00000018504 I 0.820
ZCRB1 Takifugu rubripes ENSTRUG00000016764 I 0.820
ZCRB1 Tursiops truncatus ENSTTRG00000001378 I 0.989
ZCRB1 Vicugna pacos ENSVPAG00000012040 I 0.989
zcrb1 Xenopus tropicalis ENSXETG00000006796 I 0.843
estExt_fgenesh2_pg.C_670012 Branchiostoma floridae estExt_fgenesh2_pg.C_670012 I 0.730
estExt_GenewiseH_1.C_3120062 Branchiostoma floridae estExt_GenewiseH_1.C_3120062 I 0.730
e_gw1.93.90.1 Lottia gigantea e_gw1.93.90.1 I 0.742
fgenesh1_pg.C_scaffold_178000001 Capitella teleta fgenesh1_pg.C_scaffold_178000001 I 0.742
Q6DJI9 Xenopus laevis Q6DJI9 I 0.854