LOC_Os07g22290 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os07g22290 T11808_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os07g22290.1 CCHC ZF 376 393

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

71 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
30042.m000490 Ricinus communis 30042.m000490 N 0.000
AT2G43970 Arabidopsis thaliana AT2G43970-TAIR-G N 0.000
cassava38201.valid.m1 Manihot esculenta cassava38201.valid.m1 N 0.000
cassava38202.valid.m1 Manihot esculenta cassava38202.valid.m1 N 0.000
chr1.CM0105.1300.nc Lotus japonicus chr1.CM0105.1300.nc N 0.000
Cucsa.151410 Cucumis sativus Cucsa.151410 N 0.000
XM_002881897.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4002119 N 0.000
Glyma03g42540.1 Glycine max Glyma03g42540.1 N 0.000
Glyma19g45320.1 Glycine max Glyma19g45320.1 N 0.000
GSVIVG00038251001 Vitis vinifera GSVIVG00038251001 N 0.000
MDP0000319338 Malus x domestica MDP0000319338 N 0.000
PK11097.1 Cannabis sativa PK11097.1 N 0.000
B9HGC1_POPTR Populus trichocarpa POPTR_0007s00450 N 0.000
ppa005181m Prunus persica ppa005181m N 0.000