LOC_Os07g23220 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os07g23220 T11811_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os07g23220.1 CCHC ZF 155 172

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB04099.1 Alternaria brassicicola AB04099.1 N 0.000
BC1G_07392 Botrytis cinerea BC1G_07392 N 0.000
BDBG_03134 Blastomyces dermatitidis BDBG_03134 N 0.000
ACLA_038770 Aspergillus clavatus CADACLAG00003525 N 0.000
AFLA_031810 Aspergillus flavus CADAFLAG00002556 N 0.000
AFUA_3G10840 Aspergillus fumigatus CADAFUAG00005564 N 0.000
An02g06570 Aspergillus niger CADANGAG00002175 N 0.000
ANIA_10615 Aspergillus nidulans CADANIAG00005496 N 0.000
NFIA_066410 Neosartorya fischeri CADNFIAG00006460 N 0.000
CHGG_07335 Chaetomium globosum CHGG_07335 N 0.000
CIMG_03768 Coccidioides immitis CIMG_03768 N 0.000
CPSG_03514 Coccidioides posadasii CPSG_03514 N 0.000
EAT80773.2 Phaeosphaeria nodorum EAT80773.2 N 0.000
estExt_fgenesh1_pm.C_10341 Neurospora tetrasperma estExt_fgenesh1_pm.C_10341 N 0.000
estExt_Genewise1.C_12313 Neurospora discreta estExt_Genewise1.C_12313 N 0.000
estExt_Genewise1.C_12889 Cryphonectria parasitica estExt_Genewise1.C_12889 N 0.000
estExt_Genewise1Plus.C_22270 Thielavia terrestris estExt_Genewise1Plus.C_22270 N 0.000
estExt_Genewise1Plus.C_chr_50382 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_50382 N 0.000
e_gw1.6.74.1 Phycomyces blakesleeanus e_gw1.6.74.1 N 0.000
FGSG_02080 Fusarium graminearum FGSG_02080 N 0.000
FVEG_07538 Fusarium verticillioides FVEG_07538 N 0.000
GLRG_01222 Colletotrichum graminicola GLRG_01222 N 0.000
GSTUMT00005703001 Tuber melanosporum GSTUMT00005703001 N 0.000
MCYG_00821 Microsporum canis MCYG_00821 N 0.000
MGG_06748 Magnaporthe oryzae MGG_06748 N 0.000
MGYG_01149 Microsporum gypseum MGYG_01149 N 0.000
NCU04110 Neurospora crassa NCU04110 N 0.000
PABG_02328 Paracoccidioides brasiliensis PABG_02328 N 0.000
Pa_2_3850 Podospora anserina Pa_2_3850 N 0.000
Pc18g00800 Penicillium chrysogenum Pc18g00800 N 0.000
PMAA_023720 Penicillium marneffei PMAA_023720 N 0.000
PredSwiss_EST660.1 Pneumocystis carinii PredSwiss_EST660.1 N 0.000
SJAG_00249 Schizosaccharomyces japonicus SJAG_00249 N 0.000
SNOG_11729 Stagonospora nodorum SNOG_11729 N 0.000
SOCG_03845 Schizosaccharomyces octosporus SOCG_03845 N 0.000
bpb1 Schizosaccharomyces pombe SPCC962.06c N 0.000
SPOG_03392 Schizosaccharomyces cryophilus SPOG_03392 N 0.000
SS1G_07196 Sclerotinia sclerotiorum SS1G_07196 N 0.000
TEQG_01541 Trichophyton equinum TEQG_01541 N 0.000
TERG_00369 Trichophyton rubrum TERG_00369 N 0.000
TESG_02440 Trichophyton tonsurans TESG_02440 N 0.000
VDAG_04652 Verticillium dahliae VDAG_04652 N 0.000
VDBG_09415 Verticillium albo atrum VDBG_09415 N 0.000