CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PK22510.1
(
Cannabis sativa
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
PK22510.1
T17963_0.6
Cannabis sativa genome (2012-Feb-20)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK22510.1
KH
156
205
FVKRRQHLIGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRKIV
Links
Other
KH
family RBPs
Other
Cannabis sativa
RBPs
117 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
29428.m000321
Ricinus communis
29428.m000321
N
0.000
BRADI3G35650
Brachypodium distachyon
BRADI3G35650
N
0.000
cassava18017.valid.m1
Manihot esculenta
cassava18017.valid.m1
N
0.000
CC1G_06273
Coprinopsis cinerea
CC1G_06273
N
0.000
Cucsa.364800
Cucumis sativus
Cucsa.364800
N
0.000
DEHA0A05764g
Debaryomyces hansenii
DEHA0A05764g
N
0.000
estExt_Genewise1Plus.C_30445
Agaricus bisporus
estExt_Genewise1Plus.C_30445
N
0.000
e_gw1.10.335.1
Mucor circinelloides
e_gw1.10.335.1
N
0.000
e_gw1.35.197.1
Physcomitrella patens
e_gw1.35.197.1
N
0.000
Glyma02g29190.1
Glycine max
Glyma02g29190.1
N
0.000
Glyma09g17080.1
Glycine max
Glyma09g17080.1
N
0.000
GRMZM2G056350
Zea mays
GRMZM2G056350
N
0.000
GSTUMT00006382001
Tuber melanosporum
GSTUMT00006382001
N
0.000
GSVIVG00021851001
Vitis vinifera
GSVIVG00021851001
N
0.000
gw1.198.122.1
Physcomitrella patens
gw1.198.122.1
N
0.000
LOC_Os08g31810
Oryza sativa
LOC_Os08g31810
N
0.000
MDP0000340057
Malus x domestica
MDP0000340057
N
0.000
Medtr1g137330
Medicago truncatula
Medtr1g137330
N
0.000
Medtr8g129780
Medicago truncatula
Medtr8g129780
N
0.000
B9HW06_POPTR
Populus trichocarpa
POPTR_0010s24120
N
0.000
ppa025985m
Prunus persica
ppa025985m
N
0.000
Sb03g045720
Sorghum bicolor
Sb03g045720
N
0.000