e_gw1.35.197.1 (Physcomitrella patens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw1.35.197.1 T49973_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.35.197.1 RRM 6 75

Links

Other RRM family RBPs
Other Physcomitrella patens RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
gw1.198.122.1 Physcomitrella patens gw1.198.122.1 N 0.915
e_gw1.10.335.1 Mucor circinelloides e_gw1.10.335.1 N 0.761
estExt_fgenesh2_pg.C_120136 Selaginella moellendorfii estExt_fgenesh2_pg.C_120136 N 0.746
YALI0F14245g Yarrowia lipolytica YALI0F14245g N 0.746
fgenesh1_pg.C_scaffold_4000265 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000265 N 0.732
MCYG_01275 Microsporum canis MCYG_01275 N 0.732
TEQG_06916 Trichophyton equinum TEQG_06916 N 0.718
TERG_07689 Trichophyton rubrum TERG_07689 N 0.718
ARB_01674 Arthroderma benhamiae ARB_01674 N 0.718
TESG_01475 Trichophyton tonsurans TESG_01475 N 0.718
GSTUMT00006382001 Tuber melanosporum GSTUMT00006382001 N 0.718
GSVIVG00021851001 Vitis vinifera GSVIVG00021851001 N 0.718
Sb03g045720 Sorghum bicolor Sb03g045720 N 0.718
estExt_Genewise1Plus.C_30445 Agaricus bisporus estExt_Genewise1Plus.C_30445 N 0.718
fgenesh1_pm.00609_#_590 Aspergillus carbonarius fgenesh1_pm.00609_#_590 N 0.718
SOCG_03680 Schizosaccharomyces octosporus SOCG_03680 N 0.718
TRV_00034 Trichophyton verrucosum TRV_00034 N 0.718
ANIA_04346 Aspergillus nidulans CADANIAG00006114 N 0.704
ATEG_05588 Aspergillus terreus CADATEAG00005000 N 0.704
PK02111.1 Cannabis sativa PK02111.1 N 0.704
An04g00680 Aspergillus niger CADANGAG00003776 N 0.704
AFUA_4G06350 Aspergillus fumigatus CADAFUAG00008260 N 0.704
CC1G_06273 Coprinopsis cinerea CC1G_06273 N 0.704
Glyma09g17080.1 Glycine max Glyma09g17080.1 N 0.704
Glyma02g29190.1 Glycine max Glyma02g29190.1 N 0.704
Medtr1g137330 Medicago truncatula Medtr1g137330 N 0.704
PMAA_027560 Penicillium marneffei PMAA_027560 N 0.704
MGYG_01823 Microsporum gypseum MGYG_01823 N 0.704
ppa025985m Prunus persica ppa025985m N 0.704
AMSG_02857 Thecamonas trahens AMSG_02857 N 0.700