FMR1 (Tursiops truncatus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSTTRG00000000613 T19696_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FMR1
M305_0.6 		Homo sapiens Sequence logo not available KAGCGRCUGG SELEX
Cook et al.(2011)
471_15805463.1 		0.701
FMR1
M304_0.6 		Homo sapiens Sequence logo not available GGGCKAAGGARK SELEX
Cook et al.(2011)
471_15805463 		0.701
FMR1
M016_0.6 		Homo sapiens KGACARG RNAcompete
Ray et al.(2013)
RNCMPT00016 		0.701
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000000576 KH 185 244
ENSTTRP00000000576 KH 248 310

Links

Other KH family RBPs
Other Tursiops truncatus RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R006793 Ailuropoda melanoleuca Ame_R006793 I 0.878
FMR1 Anolis carolinensis ENSACAG00000007899 N 0.870
Q0II33_BOVIN Bos taurus ENSBTAG00000012552 N 0.927
FMR1 Canis familiaris ENSCAFG00000019085 I 0.902
LOC100414871 Callithrix jacchus ENSCJAG00000003925 I 0.927
FMR1 Cavia porcellus ENSCPOG00000003723 N 0.959
FMR1 Dasypus novemcinctus ENSDNOG00000019486 I 0.813
Fmr1 Dipodomys ordii ENSDORG00000012501 N 0.894
FMR1 Echinops telfairi ENSETEG00000006061 I 0.902
FMR1 Felis catus ENSFCAG00000007228 I 0.891
FMR1 Homo sapiens ENSG00000102081 D 0.927
Q5ZHM3_CHICK Gallus gallus ENSGALG00000009177 I 0.722
FMR1 Gorilla gorilla ENSGGOG00000010373 N 0.927
FMR1 Loxodonta africana ENSLAFG00000013592 N 0.935
FMR1 Meleagris gallopavo ENSMGAG00000008270 N 0.846
FMR1 Macaca mulatta ENSMMUG00000015814 I 0.927
Fmr1 Mus musculus ENSMUSG00000000838 I 0.927
FMR1 Ornithorhynchus anatinus ENSOANG00000001097 I 0.878
FMR1 Oryctolagus cuniculus ENSOCUG00000014621 N 0.919
FMR1 Otolemur garnettii ENSOGAG00000013061 N 0.813
FMR1 Ochotona princeps ENSOPRG00000012759 N 0.894
FMR1 Procavia capensis ENSPCAG00000011936 N 0.935
ENSPPYG00000020797 Pongo pygmaeus ENSPPYG00000020797 I 0.961
FMR1 Pan troglodytes ENSPTRG00000022349 I 0.927
FMR1 Pteropus vampyrus ENSPVAG00000013386 I 0.871
FMR1_RAT Rattus norvegicus ENSRNOG00000011900 I 0.935
FMR1 Sorex araneus ENSSARG00000003475 N 0.870
FMR1 Sus scrofa ENSSSCG00000012727 I 0.891
FMR1 Spermophilus tridecemlineatus ENSSTOG00000003260 N 0.935
FMR1 Vicugna pacos ENSVPAG00000008700 I 0.885