CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FMR1
(
Anolis carolinensis
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSACAG00000007899
T18411_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000007816
KH
206
265
HEQFIVREDLMGLAIGTHGANIQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSYL
ENSACAP00000007816
KH
269
329
EDVIQVPRSLVGKVIGKNGKLIQEIVDKSGVVRVRIEAENDKNIPQEEVCETRFSLLNRNT
Links
Other
KH
family RBPs
Other
Anolis carolinensis
RBPs
36 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
FMR1
Meleagris gallopavo
ENSMGAG00000008270
N
0.884
FMR1
Ornithorhynchus anatinus
ENSOANG00000001097
I
0.876
FMR1_RAT
Rattus norvegicus
ENSRNOG00000011900
I
0.876
FMR1
Cavia porcellus
ENSCPOG00000003723
N
0.876
FMR1
Loxodonta africana
ENSLAFG00000013592
N
0.876
FMR1
Spermophilus tridecemlineatus
ENSSTOG00000003260
N
0.876
FMR1
Tursiops truncatus
ENSTTRG00000000613
I
0.870
Q0II33_BOVIN
Bos taurus
ENSBTAG00000012552
N
0.868
LOC100414871
Callithrix jacchus
ENSCJAG00000003925
I
0.868
FMR1
Procavia capensis
ENSPCAG00000011936
N
0.868
Fmr1
Mus musculus
ENSMUSG00000000838
I
0.868
FMR1
Pan troglodytes
ENSPTRG00000022349
I
0.860
FMR1
Oryctolagus cuniculus
ENSOCUG00000014621
N
0.860
FMR1
Gorilla gorilla
ENSGGOG00000010373
N
0.860
FMR1
Homo sapiens
ENSG00000102081
D
0.860
FMR1
Macaca mulatta
ENSMMUG00000015814
I
0.860
FMR1
Sorex araneus
ENSSARG00000003475
N
0.851
FMR1
Canis familiaris
ENSCAFG00000019085
I
0.851
Fmr1
Dipodomys ordii
ENSDORG00000012501
N
0.851
FMR1
Ochotona princeps
ENSOPRG00000012759
N
0.843
ENSPPYG00000020797
Pongo pygmaeus
ENSPPYG00000020797
I
0.843
FMR1
Echinops telfairi
ENSETEG00000006061
I
0.811
FMR1
Otolemur garnettii
ENSOGAG00000013061
N
0.802
FMR1
Sus scrofa
ENSSSCG00000012727
I
0.775
FMR1
Felis catus
ENSFCAG00000007228
I
0.774
FMR1
Pteropus vampyrus
ENSPVAG00000013386
I
0.770
FMR1
Vicugna pacos
ENSVPAG00000008700
I
0.770
Ame_R006793
Ailuropoda melanoleuca
Ame_R006793
I
0.763
Q5ZHM3_CHICK
Gallus gallus
ENSGALG00000009177
I
0.746
FMR1
Dasypus novemcinctus
ENSDNOG00000019486
I
0.727
AAI70204
Xenopus laevis
AAI70204
I
0.720
AAI12953
Xenopus laevis
AAI12953
I
0.720
Q2KHP9
Xenopus laevis
Q2KHP9
I
0.720
P51113
Xenopus laevis
P51113
I
0.713
fmr1
Xenopus tropicalis
ENSXETG00000019647
I
0.713
AAC59683
Xenopus laevis
AAC59683
I
0.713