FMR1 (Dasypus novemcinctus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSDNOG00000019486 T18666_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FMR1
M305_0.6 		Homo sapiens Sequence logo not available KAGCGRCUGG SELEX
Cook et al.(2011)
471_15805463.1 		0.730
FMR1
M304_0.6 		Homo sapiens Sequence logo not available GGGCKAAGGARK SELEX
Cook et al.(2011)
471_15805463 		0.730
FMR1
M016_0.6 		Homo sapiens KGACARG RNAcompete
Ray et al.(2013)
RNCMPT00016 		0.730
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDNOP00000015108 KH 220 278
ENSDNOP00000015108 KH 285 361

Links

Other KH family RBPs
Other Dasypus novemcinctus RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
FMR1 Vicugna pacos ENSVPAG00000008700 I 0.914
FMR1 Sus scrofa ENSSSCG00000012727 I 0.906
Ame_R006793 Ailuropoda melanoleuca Ame_R006793 I 0.906
FMR1 Felis catus ENSFCAG00000007228 I 0.892
FMR1 Pteropus vampyrus ENSPVAG00000013386 I 0.892
ENSPPYG00000020797 Pongo pygmaeus ENSPPYG00000020797 I 0.842
FMR1 Echinops telfairi ENSETEG00000006061 I 0.820
FMR1 Tursiops truncatus ENSTTRG00000000613 I 0.813
FMR1 Cavia porcellus ENSCPOG00000003723 N 0.784
FMR1_RAT Rattus norvegicus ENSRNOG00000011900 I 0.770
FMR1 Spermophilus tridecemlineatus ENSSTOG00000003260 N 0.763
FMR1 Loxodonta africana ENSLAFG00000013592 N 0.763
FMR1 Procavia capensis ENSPCAG00000011936 N 0.763
Fmr1 Mus musculus ENSMUSG00000000838 I 0.755
FMR1 Homo sapiens ENSG00000102081 D 0.755
LOC100414871 Callithrix jacchus ENSCJAG00000003925 I 0.755
FMR1 Macaca mulatta ENSMMUG00000015814 I 0.755
Q0II33_BOVIN Bos taurus ENSBTAG00000012552 N 0.755
FMR1 Gorilla gorilla ENSGGOG00000010373 N 0.755
FMR1 Pan troglodytes ENSPTRG00000022349 I 0.755
FMR1 Oryctolagus cuniculus ENSOCUG00000014621 N 0.748
FMR1 Ornithorhynchus anatinus ENSOANG00000001097 I 0.734
FMR1 Canis familiaris ENSCAFG00000019085 I 0.734
FMR1 Ochotona princeps ENSOPRG00000012759 N 0.727
Fmr1 Dipodomys ordii ENSDORG00000012501 N 0.727
FMR1 Anolis carolinensis ENSACAG00000007899 N 0.727
FMR1 Sorex araneus ENSSARG00000003475 N 0.705
FMR1 Meleagris gallopavo ENSMGAG00000008270 N 0.705