CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FMR1
(
Ochotona princeps
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSOPRG00000012759
T19263_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000011658
KH
148
207
HEQFVVREDLMGLAIGTHGANIQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSFL
ENSOPRP00000011658
KH
211
262
EDVIQVPRNLVGKVIGKNGKLIQEIVDKSGVVRVRIEAENEKNVAQEEEIMP
Links
Other
KH
family RBPs
Other
Ochotona princeps
RBPs
39 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
FMR1
Gorilla gorilla
ENSGGOG00000010373
N
0.982
FMR1
Oryctolagus cuniculus
ENSOCUG00000014621
N
0.973
FMR1
Canis familiaris
ENSCAFG00000019085
I
0.973
Fmr1
Dipodomys ordii
ENSDORG00000012501
N
0.973
FMR1
Homo sapiens
ENSG00000102081
D
0.965
FMR1
Macaca mulatta
ENSMMUG00000015814
I
0.965
FMR1
Pan troglodytes
ENSPTRG00000022349
I
0.965
LOC100414871
Callithrix jacchus
ENSCJAG00000003925
I
0.965
Q0II33_BOVIN
Bos taurus
ENSBTAG00000012552
N
0.948
Fmr1
Mus musculus
ENSMUSG00000000838
I
0.948
FMR1
Loxodonta africana
ENSLAFG00000013592
N
0.940
FMR1
Spermophilus tridecemlineatus
ENSSTOG00000003260
N
0.940
FMR1
Ornithorhynchus anatinus
ENSOANG00000001097
I
0.939
FMR1
Sorex araneus
ENSSARG00000003475
N
0.938
FMR1
Cavia porcellus
ENSCPOG00000003723
N
0.932
FMR1
Procavia capensis
ENSPCAG00000011936
N
0.923
FMR1_RAT
Rattus norvegicus
ENSRNOG00000011900
I
0.899
FMR1
Tursiops truncatus
ENSTTRG00000000613
I
0.894
FMR1
Otolemur garnettii
ENSOGAG00000013061
N
0.875
ENSPPYG00000020797
Pongo pygmaeus
ENSPPYG00000020797
I
0.866
FMR1
Meleagris gallopavo
ENSMGAG00000008270
N
0.860
FMR1
Anolis carolinensis
ENSACAG00000007899
N
0.843
FMR1
Echinops telfairi
ENSETEG00000006061
I
0.818
FMR1
Sus scrofa
ENSSSCG00000012727
I
0.797
FMR1
Felis catus
ENSFCAG00000007228
I
0.796
FMR1
Vicugna pacos
ENSVPAG00000008700
I
0.791
FMR1
Pteropus vampyrus
ENSPVAG00000013386
I
0.791
Ame_R006793
Ailuropoda melanoleuca
Ame_R006793
I
0.784
Q5ZHM3_CHICK
Gallus gallus
ENSGALG00000009177
I
0.782
FXR1
Dasypus novemcinctus
ENSDNOG00000019065
I
0.765
Fxr1
Dipodomys ordii
ENSDORG00000005853
I
0.765
AAI70204
Xenopus laevis
AAI70204
I
0.746
AAI12953
Xenopus laevis
AAI12953
I
0.746
Q2KHP9
Xenopus laevis
Q2KHP9
I
0.746
FMR1
Takifugu rubripes
ENSTRUG00000005362
N
0.746
fmr1
Xenopus tropicalis
ENSXETG00000019647
I
0.739
AAC59683
Xenopus laevis
AAC59683
I
0.739
P51113
Xenopus laevis
P51113
I
0.739
FMR1
Dasypus novemcinctus
ENSDNOG00000019486
I
0.727