e_gw1.3.1237.1 (Nectria haematococca)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 e_gw1.3.1237.1 T20764_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.3.1237.1 KH 143 189
e_gw1.3.1237.1 KH 248 314

Links

Other KH family RBPs
Other Nectria haematococca RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_04554 Botrytis cinerea BC1G_04554 N 0.733
ACLA_046540 Aspergillus clavatus CADACLAG00004448 N 0.754
AFLA_112630 Aspergillus flavus CADAFLAG00004997 N 0.722
AFUA_4G07220 Aspergillus fumigatus CADAFUAG00008115 N 0.738
An04g01620 Aspergillus niger CADANGAG00003873 N 0.722
ANIA_04431 Aspergillus nidulans CADANIAG00006023 N 0.722
AO090023000853 Aspergillus oryzae CADAORAG00007942 N 0.722
NFIA_109000 Neosartorya fischeri CADNFIAG00009878 N 0.746
CIMG_04080 Coccidioides immitis CIMG_04080 N 0.724
CPSG_03190 Coccidioides posadasii CPSG_03190 N 0.724
estExt_fgenesh1_pg.C_130006 Neurospora tetrasperma estExt_fgenesh1_pg.C_130006 N 0.794
estExt_fgenesh1_pm.C_70243 Myceliophthora thermophila estExt_fgenesh1_pm.C_70243 N 0.786
estExt_Genewise1.C_21959 Cryphonectria parasitica estExt_Genewise1.C_21959 N 0.786
estExt_Genewise1Plus.C_100691 Neurospora discreta estExt_Genewise1Plus.C_100691 N 0.786
fgenesh1_pm.C_scaffold_12000103 Trichoderma atroviride fgenesh1_pm.C_scaffold_12000103 N 0.817
fgenesh1_pm.C_scaffold_17000077 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_17000077 N 0.714
fgenesh2_kg.6_#_197_#_798_1_CCPH_CCPI_EXTA Thielavia terrestris fgenesh2_kg.6_#_197_#_798_1_CCPH_CCPI_EXTA N 0.732
FGSG_12899 Fusarium graminearum FGSG_12899 N 0.854
FOXG_08033 Fusarium oxysporum FOXG_08033 N 0.854
FVEG_04953 Fusarium verticillioides FVEG_04953 N 0.852
GLRG_05217 Colletotrichum graminicola GLRG_05217 N 0.819
gw1.2.55.1 Trichoderma virens gw1.2.55.1 N 0.829
HCAG_05583 Histoplasma capsulatum HCAG_05583 N 0.706
Pa_3_6460 Podospora anserina Pa_3_6460 N 0.748
Pc22g18420 Penicillium chrysogenum Pc22g18420 N 0.722
SS1G_03925 Sclerotinia sclerotiorum SS1G_03925 N 0.770
VDAG_01960 Verticillium dahliae VDAG_01960 N 0.730
VDBG_01592 Verticillium albo atrum VDBG_01592 N 0.730