CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AFUA_4G07220
(
Aspergillus fumigatus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
CADAFUAG00008115
T18197_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADAFUAP00008115
KH
166
221
TKGSTQKMIKDQTGADVTTRGSYYPDKSMATPANPPLYLHVTSTTKEGLEKAVALI
CADAFUAP00008115
KH
268
337
IPGFNLRAQVVGQGGAYVKHIQQKTRCKVQIKGRGSGFLEPSTGRESDEPMFLHVAGPDPNDVQAAKELC
Links
Other
KH
family RBPs
Other
Aspergillus fumigatus
RBPs
39 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NFIA_109000
Neosartorya fischeri
CADNFIAG00009878
N
0.992
ACLA_046540
Aspergillus clavatus
CADACLAG00004448
N
0.960
An04g01620
Aspergillus niger
CADANGAG00003873
N
0.929
AFLA_112630
Aspergillus flavus
CADAFLAG00004997
N
0.905
AO090023000853
Aspergillus oryzae
CADAORAG00007942
N
0.905
ANIA_04431
Aspergillus nidulans
CADANIAG00006023
N
0.897
HCAG_05583
Histoplasma capsulatum
HCAG_05583
N
0.865
estExt_fgenesh1_pm.C_70243
Myceliophthora thermophila
estExt_fgenesh1_pm.C_70243
N
0.865
Pc22g18420
Penicillium chrysogenum
Pc22g18420
N
0.857
BDBG_02628
Blastomyces dermatitidis
BDBG_02628
N
0.857
estExt_Genewise1Plus.C_100691
Neurospora discreta
estExt_Genewise1Plus.C_100691
N
0.857
estExt_fgenesh1_pg.C_130006
Neurospora tetrasperma
estExt_fgenesh1_pg.C_130006
N
0.849
SS1G_03925
Sclerotinia sclerotiorum
SS1G_03925
N
0.849
Pa_3_6460
Podospora anserina
Pa_3_6460
N
0.827
PABG_07569
Paracoccidioides brasiliensis
PABG_07569
N
0.825
estExt_Genewise1.C_21959
Cryphonectria parasitica
estExt_Genewise1.C_21959
N
0.825
PMAA_027060
Penicillium marneffei
PMAA_027060
N
0.817
fgenesh2_kg.6_#_197_#_798_1_CCPH_CCPI_EXTA
Thielavia terrestris
fgenesh2_kg.6_#_197_#_798_1_CCPH_CCPI_EXTA
N
0.811
GLRG_05217
Colletotrichum graminicola
GLRG_05217
N
0.811
fgenesh1_pm.C_scaffold_17000077
Mycosphaerella fijiensis
fgenesh1_pm.C_scaffold_17000077
N
0.810
estExt_Genewise1Plus.C_chr_120306
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_120306
N
0.802
GSTUMT00003892001
Tuber melanosporum
GSTUMT00003892001
N
0.802
MCYG_01186
Microsporum canis
MCYG_01186
N
0.794
FOXG_08033
Fusarium oxysporum
FOXG_08033
N
0.794
fgenesh1_pm.C_scaffold_12000103
Trichoderma atroviride
fgenesh1_pm.C_scaffold_12000103
N
0.786
MGYG_01738
Microsporum gypseum
MGYG_01738
N
0.786
TESG_01394
Trichophyton tonsurans
TESG_01394
N
0.786
TERG_07604
Trichophyton rubrum
TERG_07604
N
0.786
CIMG_04080
Coccidioides immitis
CIMG_04080
N
0.786
CPSG_03190
Coccidioides posadasii
CPSG_03190
N
0.786
FVEG_04953
Fusarium verticillioides
FVEG_04953
N
0.778
gw1.2.55.1
Trichoderma virens
gw1.2.55.1
N
0.778
VDBG_01592
Verticillium albo atrum
VDBG_01592
N
0.770
VDAG_01960
Verticillium dahliae
VDAG_01960
N
0.770
BC1G_04554
Botrytis cinerea
BC1G_04554
N
0.761
FGSG_12899
Fusarium graminearum
FGSG_12899
N
0.746
e_gw1.3.1237.1
Nectria haematococca
e_gw1.3.1237.1
N
0.738
SNOG_05204
Stagonospora nodorum
SNOG_05204
N
0.714
PTRG_04405
Pyrenophora tritici repentis
PTRG_04405
N
0.706