CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FOXG_08033
(
Fusarium oxysporum
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FOXG_08033
T17653_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FOXG_08033T0
KH
145
200
TKGSTQKMIKDETGADITTRGSYYPNKSMATAANPPLYLHITSTSKSGLEAAVAKI
FOXG_08033T0
KH
250
316
FNLRAQVVGHGGAYVKHIQQETTCRVQIKGRGSGYLEAATNQESDEDMFLHVTGPDPNMVAKAKELC
Links
Other
KH
family RBPs
Other
Fusarium oxysporum
RBPs
34 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
FVEG_04953
Fusarium verticillioides
FVEG_04953
N
0.967
FGSG_12899
Fusarium graminearum
FGSG_12899
N
0.919
gw1.2.55.1
Trichoderma virens
gw1.2.55.1
N
0.911
fgenesh1_pm.C_scaffold_12000103
Trichoderma atroviride
fgenesh1_pm.C_scaffold_12000103
N
0.889
GLRG_05217
Colletotrichum graminicola
GLRG_05217
N
0.874
e_gw1.3.1237.1
Nectria haematococca
e_gw1.3.1237.1
N
0.854
estExt_fgenesh1_pg.C_130006
Neurospora tetrasperma
estExt_fgenesh1_pg.C_130006
N
0.841
estExt_fgenesh1_pm.C_70243
Myceliophthora thermophila
estExt_fgenesh1_pm.C_70243
N
0.833
estExt_Genewise1Plus.C_100691
Neurospora discreta
estExt_Genewise1Plus.C_100691
N
0.833
VDBG_01592
Verticillium albo atrum
VDBG_01592
N
0.825
VDAG_01960
Verticillium dahliae
VDAG_01960
N
0.825
estExt_Genewise1.C_21959
Cryphonectria parasitica
estExt_Genewise1.C_21959
N
0.817
SS1G_03925
Sclerotinia sclerotiorum
SS1G_03925
N
0.810
ACLA_046540
Aspergillus clavatus
CADACLAG00004448
N
0.810
NFIA_109000
Neosartorya fischeri
CADNFIAG00009878
N
0.802
Pa_3_6460
Podospora anserina
Pa_3_6460
N
0.795
AFUA_4G07220
Aspergillus fumigatus
CADAFUAG00008115
N
0.794
fgenesh2_kg.6_#_197_#_798_1_CCPH_CCPI_EXTA
Thielavia terrestris
fgenesh2_kg.6_#_197_#_798_1_CCPH_CCPI_EXTA
N
0.780
CPSG_03190
Coccidioides posadasii
CPSG_03190
N
0.772
CIMG_04080
Coccidioides immitis
CIMG_04080
N
0.772
An04g01620
Aspergillus niger
CADANGAG00003873
N
0.770
ANIA_04431
Aspergillus nidulans
CADANIAG00006023
N
0.770
BC1G_04554
Botrytis cinerea
BC1G_04554
N
0.763
HCAG_05583
Histoplasma capsulatum
HCAG_05583
N
0.762
AFLA_112630
Aspergillus flavus
CADAFLAG00004997
N
0.762
AO090023000853
Aspergillus oryzae
CADAORAG00007942
N
0.762
BDBG_02628
Blastomyces dermatitidis
BDBG_02628
N
0.754
PABG_07569
Paracoccidioides brasiliensis
PABG_07569
N
0.754
estExt_Genewise1Plus.C_chr_120306
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_120306
N
0.754
Pc22g18420
Penicillium chrysogenum
Pc22g18420
N
0.754
fgenesh1_pm.C_scaffold_17000077
Mycosphaerella fijiensis
fgenesh1_pm.C_scaffold_17000077
N
0.754
GSTUMT00003892001
Tuber melanosporum
GSTUMT00003892001
N
0.746
PMAA_027060
Penicillium marneffei
PMAA_027060
N
0.732
MCYG_01186
Microsporum canis
MCYG_01186
N
0.706