gw1.2.55.1 (Trichoderma virens)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 gw1.2.55.1 T21256_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.2.55.1 KH 132 187
gw1.2.55.1 KH 240 306

Links

Other KH family RBPs
Other Trichoderma virens RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pm.C_scaffold_12000103 Trichoderma atroviride fgenesh1_pm.C_scaffold_12000103 N 0.929
FOXG_08033 Fusarium oxysporum FOXG_08033 N 0.911
FVEG_04953 Fusarium verticillioides FVEG_04953 N 0.886
FGSG_12899 Fusarium graminearum FGSG_12899 N 0.886
GLRG_05217 Colletotrichum graminicola GLRG_05217 N 0.843
e_gw1.3.1237.1 Nectria haematococca e_gw1.3.1237.1 N 0.829
estExt_fgenesh1_pg.C_130006 Neurospora tetrasperma estExt_fgenesh1_pg.C_130006 N 0.825
estExt_fgenesh1_pm.C_70243 Myceliophthora thermophila estExt_fgenesh1_pm.C_70243 N 0.825
estExt_Genewise1Plus.C_100691 Neurospora discreta estExt_Genewise1Plus.C_100691 N 0.817
VDBG_01592 Verticillium albo atrum VDBG_01592 N 0.802
VDAG_01960 Verticillium dahliae VDAG_01960 N 0.802
ACLA_046540 Aspergillus clavatus CADACLAG00004448 N 0.794
SS1G_03925 Sclerotinia sclerotiorum SS1G_03925 N 0.794
estExt_Genewise1.C_21959 Cryphonectria parasitica estExt_Genewise1.C_21959 N 0.794
NFIA_109000 Neosartorya fischeri CADNFIAG00009878 N 0.786
CPSG_03190 Coccidioides posadasii CPSG_03190 N 0.780
CIMG_04080 Coccidioides immitis CIMG_04080 N 0.780
Pa_3_6460 Podospora anserina Pa_3_6460 N 0.780
fgenesh2_kg.6_#_197_#_798_1_CCPH_CCPI_EXTA Thielavia terrestris fgenesh2_kg.6_#_197_#_798_1_CCPH_CCPI_EXTA N 0.780
AFUA_4G07220 Aspergillus fumigatus CADAFUAG00008115 N 0.778
ANIA_04431 Aspergillus nidulans CADANIAG00006023 N 0.762
AO090023000853 Aspergillus oryzae CADAORAG00007942 N 0.762
An04g01620 Aspergillus niger CADANGAG00003873 N 0.762
AFLA_112630 Aspergillus flavus CADAFLAG00004997 N 0.762
HCAG_05583 Histoplasma capsulatum HCAG_05583 N 0.754
Pc22g18420 Penicillium chrysogenum Pc22g18420 N 0.754
BDBG_02628 Blastomyces dermatitidis BDBG_02628 N 0.754
BC1G_04554 Botrytis cinerea BC1G_04554 N 0.748
GSTUMT00003892001 Tuber melanosporum GSTUMT00003892001 N 0.746
PABG_07569 Paracoccidioides brasiliensis PABG_07569 N 0.746
fgenesh1_pm.C_scaffold_17000077 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_17000077 N 0.738
estExt_Genewise1Plus.C_chr_120306 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_120306 N 0.738
PMAA_027060 Penicillium marneffei PMAA_027060 N 0.732