Medtr2g005410 (Medicago truncatula)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 Medtr2g005410 T21411_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr2g005410.1 KH 160 219
Medtr2g005410.2 KH 160 218

Links

Other KH family RBPs
Other Medicago truncatula RBPs

25 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT1G09660 Arabidopsis thaliana AT1G09660-TAIR-G N 0.833
AT4G26480 Arabidopsis thaliana AT4G26480-TAIR-G N 0.733
BGIOSIBCE004530 Oryza indica BGIOSIBCE004530 N 0.850
BGIOSIBCE019075 Oryza indica BGIOSIBCE019075 N 0.769
BRADI2G57220 Brachypodium distachyon BRADI2G57220 N 0.820
cassava13306.valid.m1 Manihot esculenta cassava13306.valid.m1 N 0.831
cassava13307.valid.m1 Manihot esculenta cassava13307.valid.m1 N 0.831
cassava13904.valid.m1 Manihot esculenta cassava13904.valid.m1 N 0.862
cassava410.valid.m1 Manihot esculenta cassava410.valid.m1 N 0.750
cassava411.valid.m1 Manihot esculenta cassava411.valid.m1 N 0.750
cassava412.valid.m1 Manihot esculenta cassava412.valid.m1 N 0.750
chr6.LjT09E22.140.nd Lotus japonicus chr6.LjT09E22.140.nd N 0.819
Cucsa.114230 Cucumis sativus Cucsa.114230 N 0.864
estExt_fgenesh1_pm.C_2690009 Physcomitrella patens estExt_fgenesh1_pm.C_2690009 N 0.746
estExt_Genewise1.C_2260018 Physcomitrella patens estExt_Genewise1.C_2260018 N 0.721
e_gw1.23.297.1 Selaginella moellendorfii e_gw1.23.297.1 N 0.763
XM_002892469.1 Arabidopsis lyrata fgenesh2_kg.1__1021__AT1G09660.1 N 0.833
XM_002867517.1 Arabidopsis lyrata fgenesh2_kg.7__1597__AT4G26480.1 N 0.738
GRMZM2G125531 Zea mays GRMZM2G125531 N 0.810
GSVIVG00023231001 Vitis vinifera GSVIVG00023231001 N 0.918
LOC_Os01g66300 Oryza sativa LOC_Os01g66300 N 0.850
LOC_Os05g34670 Oryza sativa LOC_Os05g34670 N 0.769
MDP0000300654 Malus x domestica MDP0000300654 N 0.700
SB03G042090 Sorghum bicolor Sb03g042090 N 0.864