MDP0000300654 (Malus x domestica)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 MDP0000300654 T21843_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000300654 KH 148 227

Links

Other KH family RBPs
Other Malus x domestica RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000077749 Malus x domestica MDP0000077749 N 0.988
ppa009432m Prunus persica ppa009432m N 0.975
cassava13309.valid.m1 Manihot esculenta cassava13309.valid.m1 N 0.917
cassava13308.valid.m1 Manihot esculenta cassava13308.valid.m1 N 0.917
cassava15324.m1 Manihot esculenta cassava15324.m1 N 0.917
PK01720.1 Cannabis sativa PK01720.1 N 0.906
29765.m000727 Ricinus communis 29765.m000727 N 0.895
A9PGS1_POPTR Populus trichocarpa POPTR_0022s00450 N 0.884
B9N0F3_POPTR Populus trichocarpa POPTR_0004s23460 N 0.882
Glyma12g28690.1 Glycine max Glyma12g28690.1 N 0.871
SB09G020640 Sorghum bicolor Sb09g020640 N 0.852
chr6.LjT09E22.140.nd Lotus japonicus chr6.LjT09E22.140.nd N 0.827
MDP0000077753 Malus x domestica MDP0000077753 N 0.825
MDP0000268130 Malus x domestica MDP0000268130 N 0.825
cassava13904.valid.m1 Manihot esculenta cassava13904.valid.m1 N 0.775
PDK_20s1559651g001 Phoenix dactylifera PDK_20s1559651g001 N 0.765
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.753
estExt_gwp_gw1.C_680211 Physcomitrella patens estExt_gwp_gw1.C_680211 N 0.750
BRADI1G53760 Brachypodium distachyon BRADI1G53760 N 0.741
BRADI1G04120 Brachypodium distachyon BRADI1G04120 N 0.728
LOC_Os07g12490 Oryza sativa LOC_Os07g12490 N 0.725
GSVIVG00023231001 Vitis vinifera GSVIVG00023231001 N 0.725
BGIOSIBCE024206 Oryza indica BGIOSIBCE024206 N 0.725
A9PGC0_POPTR Populus trichocarpa POPTR_0011s17110 N 0.718
28128.m000156 Ricinus communis 28128.m000156 N 0.713
BGIOSIBCE019075 Oryza indica BGIOSIBCE019075 N 0.713
LOC_Os05g34670 Oryza sativa LOC_Os05g34670 N 0.713
GRMZM2G125531 Zea mays GRMZM2G125531 N 0.713
LjSGA_139736.1.1 Lotus japonicus LjSGA_139736.1.1 N 0.700
Medtr2g005410 Medicago truncatula Medtr2g005410 N 0.700