CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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C14orf21
(
Cavia porcellus
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
ENSCPOG00000014406
T24173_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000012975
PUF
184
203
YCGDTHGSFVVRTLLQVLGG
ENSCPOP00000012975
PUF
307
335
LLFLRDQTSSRLLEQVLLVLEPPKLQSLF
ENSCPOP00000012975
PUF
339
373
LQGQLQILAAHPIANFPLQRLLDAITTPELLSPVF
ENSCPOP00000012975
PUF
497
527
TGPQLLSLAQSPAGSHVVDAILTSPSVTRKP
ENSCPOP00000012975
PUF
534
557
TLKGQYVALACSRHGSRVLDAIWN
Links
Other
PUF
family RBPs
Other
Cavia porcellus
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R017927
Ailuropoda melanoleuca
Ame_R017927
I
0.000
PABPC5
Bos taurus
ENSBTAG00000019942
I
0.000
Q95M35_CALJA
Callithrix jacchus
ENSCJAG00000003665
I
0.000
PABPC5
Cavia porcellus
ENSCPOG00000002555
I
0.000
Pabpc5
Dipodomys ordii
ENSDORG00000001035
I
0.000
PABPC5
Equus caballus
ENSECAG00000003452
I
0.000
PABPC5
Homo sapiens
ENSG00000174740
D
0.000
PABPC4
Gallus gallus
ENSGALG00000003800
I
0.000
PABPC5
Gorilla gorilla
ENSGGOG00000007622
I
0.000
PABPC5
Microcebus murinus
ENSMICG00000009733
I
0.000
PABP5_MACMU
Macaca mulatta
ENSMMUG00000011562
I
0.000
Pabpc5
Mus musculus
ENSMUSG00000034732
I
0.000
ENSOANG00000010001
Ornithorhynchus anatinus
ENSOANG00000010001
I
0.000
PABPC5
Oryctolagus cuniculus
ENSOCUG00000010919
I
0.000
PABPC5
Otolemur garnettii
ENSOGAG00000006882
I
0.000
ENSPPYG00000020526
Pongo pygmaeus
ENSPPYG00000020526
I
0.000
PABP5_PANTR
Pan troglodytes
ENSPTRG00000022078
I
0.000
PABPC5
Pteropus vampyrus
ENSPVAG00000006465
I
0.000
LOC100360473
Rattus norvegicus
ENSRNOG00000003354
I
0.000
PABPC5
Sorex araneus
ENSSARG00000014012
I
0.000
PABPC5
Vicugna pacos
ENSVPAG00000001063
I
0.000