CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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C14orf21
(
Cavia porcellus
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
ENSCPOG00000014406
T24173_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000012975
PUF
184
203
YCGDTHGSFVVRTLLQVLGG
ENSCPOP00000012975
PUF
307
335
LLFLRDQTSSRLLEQVLLVLEPPKLQSLF
ENSCPOP00000012975
PUF
339
373
LQGQLQILAAHPIANFPLQRLLDAITTPELLSPVF
ENSCPOP00000012975
PUF
497
527
TGPQLLSLAQSPAGSHVVDAILTSPSVTRKP
ENSCPOP00000012975
PUF
534
557
TLKGQYVALACSRHGSRVLDAIWN
Links
Other
PUF
family RBPs
Other
Cavia porcellus
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
C14orf21
Oryctolagus cuniculus
ENSOCUG00000002948
N
0.884
LOC100396802
Callithrix jacchus
ENSCJAG00000006675
N
0.878
A5D7H7_BOVIN
Bos taurus
ENSBTAG00000010235
N
0.851
C14orf21
Loxodonta africana
ENSLAFG00000028287
N
0.851
C14orf21
Homo sapiens
ENSG00000196943
N
0.846
C14orf21
Pan troglodytes
ENSPTRG00000033813
N
0.846
ENSPPYG00000005698
Pongo pygmaeus
ENSPPYG00000005698
N
0.845
LOC100054451
Equus caballus
ENSECAG00000024171
N
0.838
C14orf21
Sus scrofa
ENSSSCG00000001990
N
0.838
RGD1308396
Rattus norvegicus
ENSRNOG00000020321
N
0.824
C14orf21
Procavia capensis
ENSPCAG00000002545
N
0.808