CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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fgenesh1_pm.00795_#_61
(
Aspergillus carbonarius
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
fgenesh1_pm.00795_#_61
T27761_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.00795_#_61
RanBP ZF
135
151
ATWICPICSFSNPVPSN
fgenesh1_pm.00795_#_61
RanBP ZF
225
246
SCPRCTFVNHPSLLECEICGAS
Links
Other
RanBP ZF
family RBPs
Other
Aspergillus carbonarius
RBPs
26 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CJA02670
Caenorhabditis japonica
CJA02670
N
0.000
CJA05078
Caenorhabditis japonica
CJA05078
N
0.000
CJA10177
Caenorhabditis japonica
CJA10177
N
0.000
CJA11030
Caenorhabditis japonica
CJA11030
N
0.000
CJA15447
Caenorhabditis japonica
CJA15447
N
0.000
CJA23650
Caenorhabditis japonica
CJA23650
N
0.000
CJA26146
Caenorhabditis japonica
CJA26146
N
0.000
CJA27243
Caenorhabditis japonica
CJA27243
N
0.000
CJA29053
Caenorhabditis japonica
CJA29053
N
0.000
CPIJ007409
Culex quinquefasciatus
CPIJ007409
N
0.000
CpipJ_CPIJ007409
Culex pipiens
CpipJ_CPIJ007409
N
0.000
CRE03331
Caenorhabditis remanei
CRE03331
N
0.000
CRE06628
Caenorhabditis remanei
CRE06628
N
0.000
CRE08346
Caenorhabditis remanei
CRE08346
N
0.000
CRE09308
Caenorhabditis remanei
CRE09308
N
0.000
CRE13664
Caenorhabditis remanei
CRE13664
N
0.000
CRE13684
Caenorhabditis remanei
CRE13684
N
0.000
CRE19006
Caenorhabditis remanei
CRE19006
N
0.000
CRE24570
Caenorhabditis remanei
CRE24570
N
0.000
CRE29150
Caenorhabditis remanei
CRE29150
N
0.000
CRE30341
Caenorhabditis remanei
CRE30341
N
0.000