CIMG_03100 (Coccidioides immitis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CIMG_03100 T28659_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CIMG_03100T0 RRM 208 276
CIMG_03100T0 RRM 308 377
CIMG_03100T0 RRM 520 576

Links

Other RRM family RBPs
Other Coccidioides immitis RBPs

45 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ARB_02131 Arthroderma benhamiae ARB_02131 N 0.954
BC1G_00662 Botrytis cinerea BC1G_00662 N 0.939
BDBG_07521 Blastomyces dermatitidis BDBG_07521 N 0.954
ACLA_019550 Aspergillus clavatus CADACLAG00002508 N 0.944
AFLA_083600 Aspergillus flavus CADAFLAG00001140 N 0.939
AFUA_1G15810 Aspergillus fumigatus CADAFUAG00006904 N 0.934
An01g14180 Aspergillus niger CADANGAG00001415 N 0.939
ANIA_00917 Aspergillus nidulans CADANIAG00001739 N 0.918
AO090005001118 Aspergillus oryzae CADAORAG00003032 N 0.939
ATEG_05213 Aspergillus terreus CADATEAG00005232 N 0.949
NFIA_009510 Neosartorya fischeri CADNFIAG00001864 N 0.934
CHGG_08209 Chaetomium globosum CHGG_08209 N 0.857
CPSG_04315 Coccidioides posadasii CPSG_04315 N 1.000
estExt_fgenesh1_pg.C_70696 Myceliophthora thermophila estExt_fgenesh1_pg.C_70696 N 0.852
estExt_fgenesh1_pm.C_20497 Cryphonectria parasitica estExt_fgenesh1_pm.C_20497 N 0.776
estExt_fgenesh2_pm.C_60094 Thielavia terrestris estExt_fgenesh2_pm.C_60094 N 0.852
estExt_fgenesh5_pg.C_10453 Trichoderma reesei estExt_fgenesh5_pg.C_10453 N 0.842
estExt_Genewise1Plus.C_100357 Neurospora tetrasperma estExt_Genewise1Plus.C_100357 N 0.867
estExt_Genewise1Plus.C_160212 Neurospora discreta estExt_Genewise1Plus.C_160212 N 0.867
estExt_Genewise1Plus.C_20716 Trichoderma virens estExt_Genewise1Plus.C_20716 N 0.837
estExt_Genewise1Plus.C_320091 Mycosphaerella fijiensis estExt_Genewise1Plus.C_320091 N 0.787
estExt_Genewise1Plus.C_sca_3_chr4_2_00461 Nectria haematococca estExt_Genewise1Plus.C_sca_3_chr4_2_00461 N 0.842
e_gw1.00042.124.1 Aspergillus carbonarius e_gw1.00042.124.1 N 0.939
e_gw1.12.188.1 Trichoderma atroviride e_gw1.12.188.1 N 0.821
FGSG_05165 Fusarium graminearum FGSG_05165 N 0.842
FOXG_07909 Fusarium oxysporum FOXG_07909 N 0.847
FVEG_04832 Fusarium verticillioides FVEG_04832 N 0.847
GLRG_08678 Colletotrichum graminicola GLRG_08678 N 0.821
GSTUMT00004251001 Tuber melanosporum GSTUMT00004251001 N 0.888
HCAG_02257 Histoplasma capsulatum HCAG_02257 N 0.959
MCYG_00053 Microsporum canis MCYG_00053 N 0.954
MGG_12101 Magnaporthe oryzae MGG_12101 N 0.750
MGYG_07158 Microsporum gypseum MGYG_07158 N 0.954
Pad-1 Neurospora crassa NCU03491 N 0.867
PABG_06048 Paracoccidioides brasiliensis PABG_06048 N 0.959
Pa_6_4410 Podospora anserina Pa_6_4410 N 0.857
Pc16g14480 Penicillium chrysogenum Pc16g14480 N 0.842
PMAA_065980 Penicillium marneffei PMAA_065980 N 0.944
SS1G_00444 Sclerotinia sclerotiorum SS1G_00444 N 0.934
TEQG_08002 Trichophyton equinum TEQG_08002 N 0.954
TERG_08096 Trichophyton rubrum TERG_08096 N 0.954
TESG_03203 Trichophyton tonsurans TESG_03203 N 0.954
TRV_02070 Trichophyton verrucosum TRV_02070 N 0.954
UREG_02855 Uncinocarpus reesii UREG_02855 N 0.990
VDAG_07019 Verticillium dahliae VDAG_07019 N 0.816