PGTG_10482 (Puccinia graminis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PGTG_10482 T30022_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PGTT_10482 RRM 308 378

Links

Other RRM family RBPs
Other Puccinia graminis RBPs

150 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH44695 Xenopus laevis AAH44695 N 0.000
AAH72952 Xenopus laevis AAH72952 N 0.000
AAI08874 Xenopus laevis AAI08874 N 0.000
AGAP008136 Anopheles gambiae AGAP008136 N 0.704
AMAG_00661 Allomyces macrogynus AMAG_00661 N 0.704
AMAG_02172 Allomyces macrogynus AMAG_02172 N 0.704
amel4_ncbi_hmm11961 Apis mellifera amel4_ncbi_hmm11961 N 0.718
amel4_ncbi_hmm35613 Apis mellifera amel4_ncbi_hmm35613 N 0.718
Ame_R003489 Ailuropoda melanoleuca Ame_R003489 N 0.000
Ame_R008665 Ailuropoda melanoleuca Ame_R008665 N 0.746
BC1G_10007 Botrytis cinerea BC1G_10007 N 0.746
BDBG_04009 Blastomyces dermatitidis BDBG_04009 N 0.761
BGIBMGA008977 Bombyx mori BGIBMGA008977 N 0.732
ACLA_065360 Aspergillus clavatus CADACLAG00006149 N 0.761
AFUA_7G02170 Aspergillus fumigatus CADAFUAG00001177 N 0.761
An12g00490 Aspergillus niger CADANGAG00009498 N 0.761
ATEG_01850 Aspergillus terreus CADATEAG00001841 N 0.746
NFIA_114890 Neosartorya fischeri CADNFIAG00010434 N 0.761
CHGG_06839 Chaetomium globosum CHGG_06839 N 0.761
CIMG_07762 Coccidioides immitis CIMG_07762 N 0.761
CPSG_09333 Coccidioides posadasii CPSG_09333 N 0.761
PPIL4 Anolis carolinensis ENSACAG00000006936 N 0.746
TRA2B Anolis carolinensis ENSACAG00000008084 N 0.000
TRA2B_BOVIN Bos taurus ENSBTAG00000001697 N 0.000
A6QP53_BOVIN Bos taurus ENSBTAG00000016980 N 0.746
Q6JDI1_CANFA Canis familiaris ENSCAFG00000000379 N 0.746
TRA2B Canis familiaris ENSCAFG00000013345 N 0.000
ENSCING00000006773 Ciona intestinalis ENSCING00000006773 I 0.732
LOC100398526 Callithrix jacchus ENSCJAG00000014710 N 0.000
TRA2B Cavia porcellus ENSCPOG00000006313 N 0.000
PPIL4 Cavia porcellus ENSCPOG00000014614 N 0.746
ENSCSAVG00000010619 Ciona savignyi ENSCSAVG00000010619 N 0.746
tra2b Danio rerio ENSDARG00000002168 N 0.000
ppil4 Danio rerio ENSDARG00000043854 N 0.732
ENSDNOG00000011679 Dasypus novemcinctus ENSDNOG00000011679 N 0.000
ENSDNOG00000018192 Dasypus novemcinctus ENSDNOG00000018192 N 0.000
ENSDORG00000004468 Dipodomys ordii ENSDORG00000004468 N 0.000
LOC100067887 Equus caballus ENSECAG00000012701 N 0.000
PPIL4 Equus caballus ENSECAG00000021819 N 0.746
PPIL4 Erinaceus europaeus ENSEEUG00000000959 N 0.732
TRA2B Erinaceus europaeus ENSEEUG00000009822 N 0.000
TRA2B Felis catus ENSFCAG00000010526 N 0.000
PPIL4 Homo sapiens ENSG00000131013 N 0.746
TRA2B Homo sapiens ENSG00000136527 D 0.000
TRA2B Gasterosteus aculeatus ENSGACG00000005986 N 0.000
ENSGACG00000010109 Gasterosteus aculeatus ENSGACG00000010109 N 0.000
Q9DDU8_CHICK Gallus gallus ENSGALG00000006531 N 0.000
PPIL4 Gallus gallus ENSGALG00000012364 N 0.761
PPIL4 Gorilla gorilla ENSGGOG00000009686 N 0.746
TRA2B Gorilla gorilla ENSGGOG00000009844 N 0.000
TRA2B Loxodonta africana ENSLAFG00000017165 N 0.000
PPIL4 Loxodonta africana ENSLAFG00000026804 N 0.746
TRA2B Macropus eugenii ENSMEUG00000013768 N 0.000
ENSMGAG00000002853 Meleagris gallopavo ENSMGAG00000002853 N 0.000
PPIL4 Meleagris gallopavo ENSMGAG00000012596 N 0.761
PPIL4 Microcebus murinus ENSMICG00000006287 N 0.746
TRA2B Microcebus murinus ENSMICG00000010611 N 0.000
PPIL4 Myotis lucifugus ENSMLUG00000002766 N 0.746
ENSMLUG00000005781 Myotis lucifugus ENSMLUG00000005781 N 0.000
TRA2B Myotis lucifugus ENSMLUG00000008670 N 0.000
Q8WMQ0_MACMU Macaca mulatta ENSMMUG00000001185 N 0.000
PPIL4 Macaca mulatta ENSMMUG00000023067 N 0.746
ENSMODG00000009767 Monodelphis domestica ENSMODG00000009767 N 0.000
TRA2B Monodelphis domestica ENSMODG00000013248 N 0.000
PPIL4 Monodelphis domestica ENSMODG00000016825 N 0.746
Ppil4 Mus musculus ENSMUSG00000015757 N 0.746
Tra2b Mus musculus ENSMUSG00000022858 N 0.000
ENSOANG00000001063 Ornithorhynchus anatinus ENSOANG00000001063 N 0.761
TRA2B Ornithorhynchus anatinus ENSOANG00000013953 N 0.000
PPIL4 Oryctolagus cuniculus ENSOCUG00000007696 N 0.746
TRA2B Oryctolagus cuniculus ENSOCUG00000008940 N 0.000
TRA2B Otolemur garnettii ENSOGAG00000005386 N 0.000
PPIL4 Otolemur garnettii ENSOGAG00000014153 N 0.746
PPIL4 Ochotona princeps ENSOPRG00000005619 N 0.746
TRA2B Ochotona princeps ENSOPRG00000007990 N 0.000
Q6I6X8_ORYLA Oryzias latipes ENSORLG00000013780 N 0.000
PPIL4 Oryzias latipes ENSORLG00000015310 N 0.746
Q6I6X6_ORYLA Oryzias latipes ENSORLG00000016554 N 0.000
PPIL4 Procavia capensis ENSPCAG00000008203 N 0.746
ENSPPYG00000014374 Pongo pygmaeus ENSPPYG00000014374 N 0.000
TRA2B Pan troglodytes ENSPTRG00000015707 N 0.000
PPIL4 Pan troglodytes ENSPTRG00000018692 N 0.746
PPIL4 Pteropus vampyrus ENSPVAG00000000746 N 0.746
TRA2B Pteropus vampyrus ENSPVAG00000008615 N 0.000
Tra2b Rattus norvegicus ENSRNOG00000001783 N 0.000
D3ZLN0_RAT Rattus norvegicus ENSRNOG00000002201 N 0.000
Tra2b Rattus norvegicus ENSRNOG00000005867 N 0.000
Ppil4 Rattus norvegicus ENSRNOG00000015552 N 0.746
TRA2B Sorex araneus ENSSARG00000007638 N 0.000
PPIL4 Sorex araneus ENSSARG00000011244 N 0.746
PPIL4 Spermophilus tridecemlineatus ENSSTOG00000013980 N 0.746
TRA2B Tupaia belangeri ENSTBEG00000015927 N 0.000
SFRS10 Taeniopygia guttata ENSTGUG00000006742 N 0.000
PPIL4 Taeniopygia guttata ENSTGUG00000010655 N 0.761
SFRS10 Taeniopygia guttata ENSTGUG00000017023 N 0.000
PPIL4 Tetraodon nigroviridis ENSTNIG00000002706 N 0.761
ENSTNIG00000017210 Tetraodon nigroviridis ENSTNIG00000017210 N 0.000
ENSTRUG00000015168 Takifugu rubripes ENSTRUG00000015168 N 0.000
TRA2B Tarsius syrichta ENSTSYG00000000652 N 0.000
PPIL4 Tursiops truncatus ENSTTRG00000006014 N 0.746
TRA2B Tursiops truncatus ENSTTRG00000008243 N 0.000
PPIL4 Vicugna pacos ENSVPAG00000005157 N 0.746
TRA2B Vicugna pacos ENSVPAG00000012015 N 0.000
tra2b Xenopus tropicalis ENSXETG00000007511 N 0.000
ppil4 Xenopus tropicalis ENSXETG00000021385 N 0.732
estExt_fgenesh2_pm.C_1170007 Branchiostoma floridae estExt_fgenesh2_pm.C_1170007 N 0.718
estExt_Genewise1.C_180101 Capitella teleta estExt_Genewise1.C_180101 N 0.718
estExt_Genewise1Plus.C_40228 Batrachochytrium dendrobatidis estExt_Genewise1Plus.C_40228 N 0.732
estExt_Genewise1Plus.C_40585 Mucor circinelloides estExt_Genewise1Plus.C_40585 N 0.746
estExt_Genewise1Plus.C_61472 Cryphonectria parasitica estExt_Genewise1Plus.C_61472 N 0.761
estExt_GeneWisePlus.C_270056 Trichoderma reesei estExt_GeneWisePlus.C_270056 N 0.732
e_gw1.11.236.1 Trichoderma atroviride e_gw1.11.236.1 N 0.732
GF18772 Drosophila ananassae FBgn0095789 N 0.704
GH18460 Drosophila grimshawi FBgn0125927 N 0.704
GI24038 Drosophila mojavensis FBgn0146761 N 0.704
GL13859 Drosophila persimilis FBgn0151464 N 0.704
GJ23668 Drosophila virilis FBgn0210765 N 0.704
GA26948-RA Drosophila pseudoobscura FBgn0248319 N 0.704
fgenesh1_pm.00868_#_101 Aspergillus carbonarius fgenesh1_pm.00868_#_101 N 0.761
fgenesh1_pm.C_scaffold_3000471 Trichoderma virens fgenesh1_pm.C_scaffold_3000471 N 0.732
fgenesh1_pm.sca_11_chr8_3_0000173 Nectria haematococca fgenesh1_pm.sca_11_chr8_3_0000173 N 0.746
fgeneshTA2_pg.C_scaffold_8000290 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_8000290 N 0.761
FGSG_04479 Fusarium graminearum FGSG_04479 N 0.761
FOXG_13736 Fusarium oxysporum FOXG_13736 N 0.761
FVEG_11166 Fusarium verticillioides FVEG_11166 N 0.761
GLRG_06614 Colletotrichum graminicola GLRG_06614 N 0.732
GSTUMT00009813001 Tuber melanosporum GSTUMT00009813001 N 0.746
gw1.12.00.150.1 Ostreococcus tauri gw1.12.00.150.1 N 0.704
gwEuk.12.143.1 Ostreococcus lucimarinus gwEuk.12.143.1 N 0.704
HCAG_04417 Histoplasma capsulatum HCAG_04417 N 0.761
LOAG_08216 Loa loa LOAG_08216 N 0.704
Minc10084 Meloidogyne incognita Minc10084 N 0.718
nasonia_NCBI_hmm783174 Nasonia vitripennis nasonia_NCBI_hmm783174 N 0.732
PABG_01156 Paracoccidioides brasiliensis PABG_01156 N 0.761
PHUM268300 Pediculus humanus PHUM268300 N 0.746
PredSwiss_ASS2010_933.2 Pneumocystis carinii PredSwiss_ASS2010_933.2 N 0.761
PredSwiss_CON599.3 Pneumocystis carinii PredSwiss_CON599.3 N 0.761
RO3G_06974 Rhizopus oryzae RO3G_06974 N 0.746
SJAG_00470 Schizosaccharomyces japonicus SJAG_00470 N 0.746
Sjc_0091550 Schistosoma japonicum Sjc_0091550 N 0.718
Smp_165540 Schistosoma mansoni Smp_165540 N 0.718
SNAPOd2T00004354001 Oikopleura dioica SNAPOd2T00004354001 N 0.732
cyp6 Schizosaccharomyces pombe SPBC17G9.05 N 0.746
SPOG_01415 Schizosaccharomyces cryophilus SPOG_01415 N 0.718
UREG_02113 Uncinocarpus reesii UREG_02113 N 0.761
VDAG_02606 Verticillium dahliae VDAG_02606 N 0.761
VDBG_02138 Verticillium albo atrum VDBG_02138 N 0.746
WUBG_04730 Wuchereria bancrofti WUBG_04730 N 0.718
XP_787384.2 Strongylocentrotus purpuratus XP_787384.2 N 0.775
YALI0E31551g Yarrowia lipolytica YALI0E31551g N 0.704