SNOG_13871 (Stagonospora nodorum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SNOG_13871 T30638_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SNOT_13871 RRM 194 246
SNOT_13871 RRM 285 342
SNOT_13871 RRM 419 484
SNOT_13871 RRM 510 574

Links

Other RRM family RBPs
Other Stagonospora nodorum RBPs

49 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ARB_03865 Arthroderma benhamiae ARB_03865 N 0.901
BC1G_14118 Botrytis cinerea BC1G_14118 N 0.947
BDBG_09466 Blastomyces dermatitidis BDBG_09466 N 0.918
ACLA_068670 Aspergillus clavatus CADACLAG00006690 N 0.910
AFLA_129820 Aspergillus flavus CADAFLAG00010040 N 0.906
AFUA_2G05670 Aspergillus fumigatus CADAFUAG00003365 N 0.914
An02g14100 Aspergillus niger CADANGAG00002937 N 0.893
ANIA_07480 Aspergillus nidulans CADANIAG00000573 N 0.906
AO090001000681 Aspergillus oryzae CADAORAG00000620 N 0.902
ATEG_06757 Aspergillus terreus CADATEAG00009116 N 0.898
NFIA_082390 Neosartorya fischeri CADNFIAG00007689 N 0.910
CHGG_05709 Chaetomium globosum CHGG_05709 N 0.893
CIMG_00769 Coccidioides immitis CIMG_00769 N 0.934
CPSG_07981 Coccidioides posadasii CPSG_07981 N 0.930
EAT78895.1 Phaeosphaeria nodorum EAT78895.1 N 1.000
estExt_fgenesh1_pg.C_260060 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_260060 N 0.946
estExt_fgenesh1_pg.C_sca_10_chr8_2_00298 Nectria haematococca estExt_fgenesh1_pg.C_sca_10_chr8_2_00298 N 0.914
estExt_fgenesh1_pm.C_10719 Cryphonectria parasitica estExt_fgenesh1_pm.C_10719 N 0.872
estExt_fgenesh1_pm.C_60118 Neurospora tetrasperma estExt_fgenesh1_pm.C_60118 N 0.901
estExt_fgenesh3_kg.C_190032 Neurospora discreta estExt_fgenesh3_kg.C_190032 N 0.897
estExt_Genewise1.C_240173 Cochliobolus heterostrophus C5 estExt_Genewise1.C_240173 N 0.988
estExt_Genewise1.C_32212 Thielavia terrestris estExt_Genewise1.C_32212 N 0.922
estExt_Genewise1Plus.C_chr_30420 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_30420 N 0.910
e_gw1.10.53.1 Trichoderma virens e_gw1.10.53.1 N 0.897
e_gw1.15.72.1 Trichoderma atroviride e_gw1.15.72.1 N 0.897
e_gw1.17.287.1 Trichoderma reesei e_gw1.17.287.1 N 0.897
fgenesh1_pg.4_#_772 Myceliophthora thermophila fgenesh1_pg.4_#_772 N 0.914
fgenesh1_pm.00082_#_76 Aspergillus carbonarius fgenesh1_pm.00082_#_76 N 0.893
FGSG_05444 Fusarium graminearum FGSG_05444 N 0.893
FOXG_09455 Fusarium oxysporum FOXG_09455 N 0.893
FVEG_07083 Fusarium verticillioides FVEG_07083 N 0.893
GLRG_03643 Colletotrichum graminicola GLRG_03643 N 0.889
GSTUMT00008077001 Tuber melanosporum GSTUMT00008077001 N 0.947
MCYG_03534 Microsporum canis MCYG_03534 N 0.905
MGG_08898 Magnaporthe oryzae MGG_08898 N 0.881
MGYG_03143 Microsporum gypseum MGYG_03143 N 0.901
NCU06459 Neurospora crassa NCU06459 N 0.901
PABG_04754 Paracoccidioides brasiliensis PABG_04754 N 0.921
Pa_7_9880 Podospora anserina Pa_7_9880 N 0.905
Pc22g08880 Penicillium chrysogenum Pc22g08880 N 0.902
PMAA_071470 Penicillium marneffei PMAA_071470 N 0.918
PTRG_09392 Pyrenophora tritici repentis PTRG_09392 N 0.971
SS1G_13716 Sclerotinia sclerotiorum SS1G_13716 N 0.942
TEQG_01254 Trichophyton equinum TEQG_01254 N 0.901
TERG_04964 Trichophyton rubrum TERG_04964 N 0.901
TESG_05970 Trichophyton tonsurans TESG_05970 N 0.901
UREG_00743 Uncinocarpus reesii UREG_00743 N 0.934
VDAG_06364 Verticillium dahliae VDAG_06364 N 0.897
VDBG_08703 Verticillium albo atrum VDBG_08703 N 0.872