e_gw1.10.53.1 (Trichoderma virens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw1.10.53.1 T49684_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.10.53.1 RRM 196 248
e_gw1.10.53.1 RRM 287 344
e_gw1.10.53.1 RRM 421 486
e_gw1.10.53.1 RRM 512 576

Links

Other RRM family RBPs
Other Trichoderma virens RBPs

49 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.17.287.1 Trichoderma reesei e_gw1.17.287.1 N 0.983
e_gw1.15.72.1 Trichoderma atroviride e_gw1.15.72.1 N 0.979
estExt_fgenesh1_pg.C_sca_10_chr8_2_00298 Nectria haematococca estExt_fgenesh1_pg.C_sca_10_chr8_2_00298 N 0.963
fgenesh1_pg.4_#_772 Myceliophthora thermophila fgenesh1_pg.4_#_772 N 0.942
CHGG_05709 Chaetomium globosum CHGG_05709 N 0.942
estExt_Genewise1.C_32212 Thielavia terrestris estExt_Genewise1.C_32212 N 0.938
VDAG_06364 Verticillium dahliae VDAG_06364 N 0.938
Pa_7_9880 Podospora anserina Pa_7_9880 N 0.934
FVEG_07083 Fusarium verticillioides FVEG_07083 N 0.934
GLRG_03643 Colletotrichum graminicola GLRG_03643 N 0.934
FGSG_05444 Fusarium graminearum FGSG_05444 N 0.934
FOXG_09455 Fusarium oxysporum FOXG_09455 N 0.934
estExt_fgenesh1_pm.C_60118 Neurospora tetrasperma estExt_fgenesh1_pm.C_60118 N 0.934
NCU06459 Neurospora crassa NCU06459 N 0.930
MGG_08898 Magnaporthe oryzae MGG_08898 N 0.926
estExt_fgenesh3_kg.C_190032 Neurospora discreta estExt_fgenesh3_kg.C_190032 N 0.926
estExt_fgenesh1_pm.C_10719 Cryphonectria parasitica estExt_fgenesh1_pm.C_10719 N 0.918
VDBG_08703 Verticillium albo atrum VDBG_08703 N 0.909
estExt_fgenesh1_pg.C_260060 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_260060 N 0.905
GSTUMT00008077001 Tuber melanosporum GSTUMT00008077001 N 0.901
PTRG_09392 Pyrenophora tritici repentis PTRG_09392 N 0.901
SNOG_13871 Stagonospora nodorum SNOG_13871 N 0.897
BC1G_14118 Botrytis cinerea BC1G_14118 N 0.897
EAT78895.1 Phaeosphaeria nodorum EAT78895.1 N 0.897
BDBG_09466 Blastomyces dermatitidis BDBG_09466 N 0.893
SS1G_13716 Sclerotinia sclerotiorum SS1G_13716 N 0.893
PABG_04754 Paracoccidioides brasiliensis PABG_04754 N 0.889
estExt_Genewise1.C_240173 Cochliobolus heterostrophus C5 estExt_Genewise1.C_240173 N 0.889
PMAA_071470 Penicillium marneffei PMAA_071470 N 0.885
AFUA_2G05670 Aspergillus fumigatus CADAFUAG00003365 N 0.881
NFIA_082390 Neosartorya fischeri CADNFIAG00007689 N 0.877
ATEG_06757 Aspergillus terreus CADATEAG00009116 N 0.872
CIMG_00769 Coccidioides immitis CIMG_00769 N 0.872
CPSG_07981 Coccidioides posadasii CPSG_07981 N 0.869
MCYG_03534 Microsporum canis MCYG_03534 N 0.868
ACLA_068670 Aspergillus clavatus CADACLAG00006690 N 0.868
UREG_00743 Uncinocarpus reesii UREG_00743 N 0.868
fgenesh1_pm.00082_#_76 Aspergillus carbonarius fgenesh1_pm.00082_#_76 N 0.868
estExt_Genewise1Plus.C_chr_30420 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_30420 N 0.865
AFLA_129820 Aspergillus flavus CADAFLAG00010040 N 0.864
Pc22g08880 Penicillium chrysogenum Pc22g08880 N 0.864
AO090001000681 Aspergillus oryzae CADAORAG00000620 N 0.860
An02g14100 Aspergillus niger CADANGAG00002937 N 0.860
TERG_04964 Trichophyton rubrum TERG_04964 N 0.857
TEQG_01254 Trichophyton equinum TEQG_01254 N 0.856
MGYG_03143 Microsporum gypseum MGYG_03143 N 0.856
TESG_05970 Trichophyton tonsurans TESG_05970 N 0.856
ARB_03865 Arthroderma benhamiae ARB_03865 N 0.856
ANIA_07480 Aspergillus nidulans CADANIAG00000573 N 0.848