estExt_fgenesh1_pg.C_260060 (Mycosphaerella fijiensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_pg.C_260060 T50553_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_260060 RRM 204 256
estExt_fgenesh1_pg.C_260060 RRM 295 352
estExt_fgenesh1_pg.C_260060 RRM 429 494
estExt_fgenesh1_pg.C_260060 RRM 520 583

Links

Other RRM family RBPs
Other Mycosphaerella fijiensis RBPs

49 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1.C_240173 Cochliobolus heterostrophus C5 estExt_Genewise1.C_240173 N 0.946
EAT78895.1 Phaeosphaeria nodorum EAT78895.1 N 0.946
SNOG_13871 Stagonospora nodorum SNOG_13871 N 0.946
PTRG_09392 Pyrenophora tritici repentis PTRG_09392 N 0.942
fgenesh1_pg.4_#_772 Myceliophthora thermophila fgenesh1_pg.4_#_772 N 0.942
estExt_Genewise1.C_32212 Thielavia terrestris estExt_Genewise1.C_32212 N 0.938
BC1G_14118 Botrytis cinerea BC1G_14118 N 0.930
SS1G_13716 Sclerotinia sclerotiorum SS1G_13716 N 0.926
PABG_04754 Paracoccidioides brasiliensis PABG_04754 N 0.921
estExt_fgenesh1_pm.C_60118 Neurospora tetrasperma estExt_fgenesh1_pm.C_60118 N 0.921
NCU06459 Neurospora crassa NCU06459 N 0.921
estExt_fgenesh3_kg.C_190032 Neurospora discreta estExt_fgenesh3_kg.C_190032 N 0.921
BDBG_09466 Blastomyces dermatitidis BDBG_09466 N 0.918
GSTUMT00008077001 Tuber melanosporum GSTUMT00008077001 N 0.918
estExt_Genewise1Plus.C_chr_30420 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_30420 N 0.918
Pa_7_9880 Podospora anserina Pa_7_9880 N 0.917
CHGG_05709 Chaetomium globosum CHGG_05709 N 0.917
PMAA_071470 Penicillium marneffei PMAA_071470 N 0.914
e_gw1.17.287.1 Trichoderma reesei e_gw1.17.287.1 N 0.914
VDAG_06364 Verticillium dahliae VDAG_06364 N 0.913
CIMG_00769 Coccidioides immitis CIMG_00769 N 0.913
UREG_00743 Uncinocarpus reesii UREG_00743 N 0.909
MCYG_03534 Microsporum canis MCYG_03534 N 0.909
CPSG_07981 Coccidioides posadasii CPSG_07981 N 0.905
e_gw1.10.53.1 Trichoderma virens e_gw1.10.53.1 N 0.905
TERG_04964 Trichophyton rubrum TERG_04964 N 0.905
TEQG_01254 Trichophyton equinum TEQG_01254 N 0.905
GLRG_03643 Colletotrichum graminicola GLRG_03643 N 0.905
ARB_03865 Arthroderma benhamiae ARB_03865 N 0.905
TESG_05970 Trichophyton tonsurans TESG_05970 N 0.905
MGG_08898 Magnaporthe oryzae MGG_08898 N 0.905
MGYG_03143 Microsporum gypseum MGYG_03143 N 0.905
estExt_fgenesh1_pg.C_sca_10_chr8_2_00298 Nectria haematococca estExt_fgenesh1_pg.C_sca_10_chr8_2_00298 N 0.897
e_gw1.15.72.1 Trichoderma atroviride e_gw1.15.72.1 N 0.897
AFUA_2G05670 Aspergillus fumigatus CADAFUAG00003365 N 0.893
An02g14100 Aspergillus niger CADANGAG00002937 N 0.893
NFIA_082390 Neosartorya fischeri CADNFIAG00007689 N 0.889
ACLA_068670 Aspergillus clavatus CADACLAG00006690 N 0.889
fgenesh1_pm.00082_#_76 Aspergillus carbonarius fgenesh1_pm.00082_#_76 N 0.889
estExt_fgenesh1_pm.C_10719 Cryphonectria parasitica estExt_fgenesh1_pm.C_10719 N 0.888
VDBG_08703 Verticillium albo atrum VDBG_08703 N 0.888
FGSG_05444 Fusarium graminearum FGSG_05444 N 0.888
ATEG_06757 Aspergillus terreus CADATEAG00009116 N 0.885
ANIA_07480 Aspergillus nidulans CADANIAG00000573 N 0.885
AFLA_129820 Aspergillus flavus CADAFLAG00010040 N 0.885
Pc22g08880 Penicillium chrysogenum Pc22g08880 N 0.885
FVEG_07083 Fusarium verticillioides FVEG_07083 N 0.884
FOXG_09455 Fusarium oxysporum FOXG_09455 N 0.884
AO090001000681 Aspergillus oryzae CADAORAG00000620 N 0.881